New Results
Genomic analysis of diet composition finds novel loci and associations with health and lifestyle
S Fleur W Meddens, Ronald de Vlaming, Peter Bowers, Casper AP Burik, Richard Karlsson Linnér, Chanwook Lee, Aysu Okbay, Patrick Turley, Cornelius A Rietveld, Mark Alan Fontana, Mohsen Ghanbari, Fumiaki Imamura, George McMahon, Peter J van der Most, Voortman Trudy, Kaitlin H Wade, Emma L Anderson, Kim VE Braun, Pauline M Emmett, Tonũ Esko, Juan R Gonzalez, Jessica C Kiefte-de Jong, Jian’a Luan, Claudia Langenberg, Taulant Muka, Susan Ring, Fernando Rivadeneira, Josje D Schoufour, Harold Snieder, Frank JA van Rooij, Bruce HR Wolffenbuttel, 23andMe Research Team, EPIC-InterAct Consortium, Lifelines Cohort Study, George Davey Smith, Oscar H Franco, Nita G Forouhi, M Arfan Ikram, Andre G Uitterlinden, Jana V van Vliet-Ostaptchouk, Nick J Wareham, David Cesarini, K Paige Harden, James J Lee, Daniel J Benjamin, Carson C Chow, Philipp D Koellinger
doi: https://doi.org/10.1101/383406
S Fleur W Meddens
School of Business and Economics, VU University Amsterdam, De Boelelaan 1105, 1081 HV, Amsterdam, The NetherlandsDepartment of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, VU University Amsterdam, De Boelelaan 1085, 1081 HV, Rotterdam, The NetherlandsErasmus University Rotterdam Institute for Behavior and Biology, Erasmus School of Economics, Erasmus University Rotterdam, Burgemeester Oudlaan 50, Rotterdam, 3062 PA, Rotterdam, The Netherlands
Ronald de Vlaming
School of Business and Economics, VU University Amsterdam, De Boelelaan 1105, 1081 HV, Amsterdam, The Netherlands
Peter Bowers
Department of Economics, Harvard University, Cambridge, Massachusetts 02138, USA
Casper AP Burik
School of Business and Economics, VU University Amsterdam, De Boelelaan 1105, 1081 HV, Amsterdam, The Netherlands
Richard Karlsson Linnér
School of Business and Economics, VU University Amsterdam, De Boelelaan 1105, 1081 HV, Amsterdam, The NetherlandsDepartment of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, VU University Amsterdam, De Boelelaan 1085, 1081 HV, Rotterdam, The NetherlandsErasmus University Rotterdam Institute for Behavior and Biology, Erasmus School of Economics, Erasmus University Rotterdam, Burgemeester Oudlaan 50, Rotterdam, 3062 PA, Rotterdam, The Netherlands
Chanwook Lee
Department of Economics, Harvard University, Cambridge, Massachusetts 02138, USA
Aysu Okbay
School of Business and Economics, VU University Amsterdam, De Boelelaan 1105, 1081 HV, Amsterdam, The Netherlands
Patrick Turley
Analytical and Translational Genetics Unit, Massachusetts General Hospital, Richard B. Simches Research building, 185 Cambridge St, CPZN-6818, Boston, MA 02114, USAStanley Center for Psychiatric Genomics, The Broad Institute at Harvard and MIT, 75 Ames St, Cambridge, MA 02142, USABehavioral and Health Genomics Center, Center for Economic and Social Research, University of Southern California, 635 Downey Way, Los Angeles, CA 90089, USA
Cornelius A Rietveld
Department of Applied Economics, Erasmus School of Economics, Erasmus University Rotterdam, Burgemeester Oudlaan 50, 3062 PA, Rotterdam, The NetherlandsDepartment of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The NetherlandsErasmus University Rotterdam Institute for Behavior and Biology, Erasmus School of Economics, Erasmus University Rotterdam, Burgemeester Oudlaan 50, Rotterdam, 3062 PA, Rotterdam, The Netherlands
Mark Alan Fontana
Center for the Advancement of Value in Musculoskeletal Care, Hospital for Special Surgery, 535 East 70th Street, New York, NY 10021, USADepartment of Healthcare Policy and Research, Weill Cornell Medical College, Cornell University, 402 East 67th Street, New York, NY 10065, USA
Mohsen Ghanbari
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The NetherlandsDepartment of Genetics, School of Medicine, Mashhad University of Medical Sciences, Azadi Square, University Campus, 9177948564, Mashhad, Iran
Fumiaki Imamura
MRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus Cambridge, CB2 0QQ Cambridge, United Kingdom
George McMahon
Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Oakfield House, Oakfield Grove, BS8 2BN, Bristol, United Kingdom
Peter J van der Most
Department of Epidemiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9713 GZ Groningen, The Netherlands
Voortman Trudy
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Kaitlin H Wade
Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Oakfield House, Oakfield Grove, BS8 2BN, Bristol, United Kingdom
Emma L Anderson
Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Oakfield House, Oakfield Grove, BS8 2BN, Bristol, United Kingdom
Kim VE Braun
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Pauline M Emmett
Population Health Sciences, Bristol Medical School, University of Bristol, Oakfield House, Oakfield Grove, BS8 2BN, Bristol, United Kingdom
Tonũ Esko
Estonian Genome Center, University of Tartu, Tartu, 51010, Estonia
Juan R Gonzalez
Barcelona Institute for Global Health (ISGlobal), Barcelona, 8003, SpainUniversitat Pompeu Fabra (UPF), Barcelona, 8003, SpainCIBER Epidemiologí y Salud Pública (CIBERESP), Madrid, 280229, Spain
Jessica C Kiefte-de Jong
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The NetherlandsLeiden University College, Anna van Buerenplein 301, 2595 DG, Den Haag, The Netherlands
Jian’a Luan
MRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus Cambridge, CB2 0QQ Cambridge, United Kingdom
Claudia Langenberg
MRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus Cambridge, CB2 0QQ Cambridge, United Kingdom
Taulant Muka
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Susan Ring
Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Oakfield House, Oakfield Grove, BS8 2BN, Bristol, United Kingdom
Fernando Rivadeneira
Department of Internal Medicine, Erasmus MC University Medical Center, Wytemaweg 80, Rotterdam, 3015 GE, The Netherlands
Josje D Schoufour
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Harold Snieder
Department of Epidemiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9713 GZ Groningen, The Netherlands
Frank JA van Rooij
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Bruce HR Wolffenbuttel
Department of Endocrinology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9713 GZ, Groningen, The Netherlands
George Davey Smith
Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Oakfield House, Oakfield Grove, BS8 2BN, Bristol, United Kingdom
Oscar H Franco
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Nita G Forouhi
MRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus Cambridge, CB2 0QQ Cambridge, United Kingdom
M Arfan Ikram
Department of Epidemiology, Erasmus MC, University Medical Center, Wytemaweg 80, 3015 GE, Rotterdam, The Netherlands
Andre G Uitterlinden
Department of Internal Medicine, Erasmus MC University Medical Center, Wytemaweg 80, Rotterdam, 3015 GE, The Netherlands
Jana V van Vliet-Ostaptchouk
Department of Endocrinology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, 9713 GZ, Groningen, The Netherlands
Nick J Wareham
MRC Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus Cambridge, CB2 0QQ Cambridge, United Kingdom
David Cesarini
Department of Economics, New York University, 19 W. 4th Street, New York, NY 10012, USA
K Paige Harden
Department of Psychology, University of Texas at Austin, 108 E. Dean Keeton Stop #A8000, Austin, TX 78704, USA
James J Lee
Department of Psychology, University of Minnesota Twin Cities, 75 East River Parkway, Minneapolis, MN 55455, USA
Daniel J Benjamin
National Bureau of Economic Research, 1050 Massachusetts Ave, Cambridge, MA 02138, USABehavioral and Health Genomics Center, Center for Economic and Social Research, University of Southern California, 635 Downey Way, Los Angeles, CA 90089, USADepartment of Economics, University of Southern California, 635 Downey Way, Los Angeles, CA 90089, USA
Carson C Chow
Laboratory of Biological Modeling, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA
Philipp D Koellinger
School of Business and Economics, VU University Amsterdam, De Boelelaan 1105, 1081 HV, Amsterdam, The Netherlands
Abstract
We conducted genome-wide association study (GWAS) meta-analyses of relative caloric intake from fat, protein, carbohydrates and sugar in over 235,000 individuals. We identified 21 approximately independent lead SNPs. Relative protein intake exhibits the strongest relationships with poor health, including positive genetic associations with obesity, type 2 diabetes, and heart disease (rg ≈ 0.15 – 0.5). Relative carbohydrate and sugar intake have negative genetic correlations with waist circumference, waist-hip ratio, and neighborhood poverty (|rg| ≈ 0.1 – 0.3). Overall, our results show that the relative intake of each macronutrient has a distinct genetic architecture and pattern of genetic correlations suggestive of health implications beyond caloric content.
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Posted August 02, 2018.
Genomic analysis of diet composition finds novel loci and associations with health and lifestyle
S Fleur W Meddens, Ronald de Vlaming, Peter Bowers, Casper AP Burik, Richard Karlsson Linnér, Chanwook Lee, Aysu Okbay, Patrick Turley, Cornelius A Rietveld, Mark Alan Fontana, Mohsen Ghanbari, Fumiaki Imamura, George McMahon, Peter J van der Most, Voortman Trudy, Kaitlin H Wade, Emma L Anderson, Kim VE Braun, Pauline M Emmett, Tonũ Esko, Juan R Gonzalez, Jessica C Kiefte-de Jong, Jian’a Luan, Claudia Langenberg, Taulant Muka, Susan Ring, Fernando Rivadeneira, Josje D Schoufour, Harold Snieder, Frank JA van Rooij, Bruce HR Wolffenbuttel, 23andMe Research Team, EPIC-InterAct Consortium, Lifelines Cohort Study, George Davey Smith, Oscar H Franco, Nita G Forouhi, M Arfan Ikram, Andre G Uitterlinden, Jana V van Vliet-Ostaptchouk, Nick J Wareham, David Cesarini, K Paige Harden, James J Lee, Daniel J Benjamin, Carson C Chow, Philipp D Koellinger
bioRxiv 383406; doi: https://doi.org/10.1101/383406
Genomic analysis of diet composition finds novel loci and associations with health and lifestyle
S Fleur W Meddens, Ronald de Vlaming, Peter Bowers, Casper AP Burik, Richard Karlsson Linnér, Chanwook Lee, Aysu Okbay, Patrick Turley, Cornelius A Rietveld, Mark Alan Fontana, Mohsen Ghanbari, Fumiaki Imamura, George McMahon, Peter J van der Most, Voortman Trudy, Kaitlin H Wade, Emma L Anderson, Kim VE Braun, Pauline M Emmett, Tonũ Esko, Juan R Gonzalez, Jessica C Kiefte-de Jong, Jian’a Luan, Claudia Langenberg, Taulant Muka, Susan Ring, Fernando Rivadeneira, Josje D Schoufour, Harold Snieder, Frank JA van Rooij, Bruce HR Wolffenbuttel, 23andMe Research Team, EPIC-InterAct Consortium, Lifelines Cohort Study, George Davey Smith, Oscar H Franco, Nita G Forouhi, M Arfan Ikram, Andre G Uitterlinden, Jana V van Vliet-Ostaptchouk, Nick J Wareham, David Cesarini, K Paige Harden, James J Lee, Daniel J Benjamin, Carson C Chow, Philipp D Koellinger
bioRxiv 383406; doi: https://doi.org/10.1101/383406
Subject Area
Subject Areas
- Biochemistry (2282)
- Bioengineering (1597)
- Bioinformatics (9115)
- Biophysics (3648)
- Cancer Biology (2715)
- Cell Biology (3851)
- Clinical Trials (134)
- Developmental Biology (2449)
- Ecology (3791)
- Epidemiology (2017)
- Evolutionary Biology (6518)
- Genetics (4894)
- Genomics (6100)
- Immunology (1973)
- Microbiology (6420)
- Molecular Biology (2499)
- Neuroscience (15962)
- Paleontology (116)
- Pathology (385)
- Physiology (965)
- Plant Biology (2246)
- Synthetic Biology (777)
- Systems Biology (2550)
- Zoology (395)