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Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species
View ORCID ProfileGenevieve L. Stein-O’Brien, Brian S. Clark, Thomas Sherman, Cristina Zibetti, Qiwen Hu, Rachel Sealfon, Sheng Liu, Jiang Qian, Carlo Colantuoni, View ORCID ProfileSeth Blackshaw, View ORCID ProfileLoyal A. Goff, View ORCID ProfileElana J. Fertig
doi: https://doi.org/10.1101/395004
Genevieve L. Stein-O’Brien
1Department of Oncology, Division of Biostatistics and Bioinformatics, Sidney Kimmel Comprehensive Cancer Center, Baltimore, MD, USA
2Solomon H. Snyder Department of Neuroscience, Baltimore, MD, USA
6McKusick-Nathans Institute for Genetic Medicine, Baltimore, MD, USA
7Institute for Data Intensive Engineering and Science, Baltimore, MD, USA
Brian S. Clark
2Solomon H. Snyder Department of Neuroscience, Baltimore, MD, USA
16Present Address: Department of Ophthalmology and Visual Sciences, Washington University, St. Louis, MO, USA
Thomas Sherman
1Department of Oncology, Division of Biostatistics and Bioinformatics, Sidney Kimmel Comprehensive Cancer Center, Baltimore, MD, USA
Cristina Zibetti
2Solomon H. Snyder Department of Neuroscience, Baltimore, MD, USA
Qiwen Hu
12Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA, USA
Rachel Sealfon
13Flatiron Institute, New York, NY, USA
Sheng Liu
5Department of Ophthalmology, Baltimore, MD, USA
Jiang Qian
5Department of Ophthalmology, Baltimore, MD, USA
Carlo Colantuoni
2Solomon H. Snyder Department of Neuroscience, Baltimore, MD, USA
4Department of Neurology, Baltimore, MD, USA
Seth Blackshaw
2Solomon H. Snyder Department of Neuroscience, Baltimore, MD, USA
3Kavli Neurodiscovery Institute, Baltimore, MD, USA
4Department of Neurology, Baltimore, MD, USA
5Department of Ophthalmology, Baltimore, MD, USA
11Institute for Cell Engineering Johns Hopkins University School of Medicine, Baltimore, MD, USA
Loyal A. Goff
2Solomon H. Snyder Department of Neuroscience, Baltimore, MD, USA
3Kavli Neurodiscovery Institute, Baltimore, MD, USA
6McKusick-Nathans Institute for Genetic Medicine, Baltimore, MD, USA
14Senior Authors
Elana J. Fertig
1Department of Oncology, Division of Biostatistics and Bioinformatics, Sidney Kimmel Comprehensive Cancer Center, Baltimore, MD, USA
6McKusick-Nathans Institute for Genetic Medicine, Baltimore, MD, USA
7Institute for Data Intensive Engineering and Science, Baltimore, MD, USA
8Institute for Computational Medicine, Baltimore, MD, USA
9Mathematical Institute for Data Science, Baltimore, MD, USA
10Center for Human Systems Biology, Baltimore, MD, USA
14Senior Authors
15Lead Contact
Posted August 20, 2018.
Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species
Genevieve L. Stein-O’Brien, Brian S. Clark, Thomas Sherman, Cristina Zibetti, Qiwen Hu, Rachel Sealfon, Sheng Liu, Jiang Qian, Carlo Colantuoni, Seth Blackshaw, Loyal A. Goff, Elana J. Fertig
bioRxiv 395004; doi: https://doi.org/10.1101/395004
Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species
Genevieve L. Stein-O’Brien, Brian S. Clark, Thomas Sherman, Cristina Zibetti, Qiwen Hu, Rachel Sealfon, Sheng Liu, Jiang Qian, Carlo Colantuoni, Seth Blackshaw, Loyal A. Goff, Elana J. Fertig
bioRxiv 395004; doi: https://doi.org/10.1101/395004
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