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Lineage calling can identify antibiotic resistant clones within minutes
View ORCID ProfileKarel Břinda, Alanna Callendrello, Lauren Cowley, Themoula Charalampous, Robyn S Lee, Derek R MacFadden, Gregory Kucherov, Justin O’Grady, Michael Baym, William P Hanage
doi: https://doi.org/10.1101/403204
Karel Břinda
1Center for Communicable Disease Dynamic, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, USA
2Department of Biomedical Informatics, Harvard Medical School, Boston, USA
Alanna Callendrello
1Center for Communicable Disease Dynamic, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, USA
Lauren Cowley
1Center for Communicable Disease Dynamic, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, USA
Themoula Charalampous
3University of East Anglia, Norwich Research Park, Norwich, UK
Robyn S Lee
1Center for Communicable Disease Dynamic, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, USA
Derek R MacFadden
1Center for Communicable Disease Dynamic, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, USA
4Division of Infectious Diseases, Department of Medicine, University of Toronto, Canada
Gregory Kucherov
5CNRS/LIGM Université Paris-Est, Marne-la-Vallée, France
6Skolkovo Institute of Science and Technology, Moscow, Russia
Justin O’Grady
7Quadram Institute Bioscience, Norwich Research Park, Norwich, UK
3University of East Anglia, Norwich Research Park, Norwich, UK
Michael Baym
2Department of Biomedical Informatics, Harvard Medical School, Boston, USA
8Laboratory of Systems Pharmacology, Harvard Medical School, Boston, USA
William P Hanage
1Center for Communicable Disease Dynamic, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, USA
Posted August 29, 2018.
Lineage calling can identify antibiotic resistant clones within minutes
Karel Břinda, Alanna Callendrello, Lauren Cowley, Themoula Charalampous, Robyn S Lee, Derek R MacFadden, Gregory Kucherov, Justin O’Grady, Michael Baym, William P Hanage
bioRxiv 403204; doi: https://doi.org/10.1101/403204
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