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Identification of SMARCD1 as a syndromic intellectual disability gene that is required for memory and context-dependent regulation of neuronal genes in Drosophila

View ORCID ProfileKevin C.J. Nixon, Justine Rousseau, Max H. Stone, Mohammed Sarikahya, Sophie Ehresmann, Seiji Mizuno, Naomichi Matsumoto, Noriko Miyake, DDD study
doi: https://doi.org/10.1101/422188
Kevin C.J. Nixon
1Department of Physiology and Pharmacology, Schulich School of Medicine and Dentistry, Western University, London, Ontario, Canada
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  • ORCID record for Kevin C.J. Nixon
Justine Rousseau
2CHU-Sainte Justine Research Center, University of Montreal, Montreal, QC, Canada
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Max H. Stone
3Department of Biology, Faculty of Science, Western University, London, Ontario, Canada
4Division of Genetics and Development, Children’s Health Research Institute, London, Ontario, Canada
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Mohammed Sarikahya
3Department of Biology, Faculty of Science, Western University, London, Ontario, Canada
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Sophie Ehresmann
2CHU-Sainte Justine Research Center, University of Montreal, Montreal, QC, Canada
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Seiji Mizuno
5Department of Pediatrics, Central Hospital, Aichi Human Service Center, Aichi, Japan
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Naomichi Matsumoto
6Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan
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Noriko Miyake
6Yokohama City University Graduate School of Medicine, Yokohama 236-0004, Japan
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Abstract

Mutations in several genes encoding components of the SWI/SNF chromatin remodeling complex cause syndromic intellectual disability (ID). Here, we report on 5 individuals with mutations in the SMARCD1 gene, presenting with ID, developmental delay, hypotonia, feeding difficulties, and small extremities. The mutations were proven to be de novo in 4 of the 5 individuals. Mutations in other SWI/SNF components cause Coffin-Siris, Nicolaides-Baraitser, or other syndromic ID disorders. Although the individuals presented here have some clinical overlap with these disorders, they lack the typical facial dysmorphisms. To gain insight into the function of SMARCD1 in neurons, we investigated the Drosophila ortholog, Bap60, in postmitotic memory-forming neurons of the adult Drosophila mushroom body (MB). Targeted knockdown of Bap60 in the MB of adult flies causes defects in long-term memory. Mushroom body specific transcriptome analysis revealed that Bap60 is required for context-dependent expression of genes involved in neuron function and development in juvenile flies when synaptic connections are actively being formed in response to experience. Taken together, we identify SMARCD1 mutations as a novel cause of ID, and establish a role for the SMARCD1 ortholog Bap60 in regulation of neurodevelopmental genes during a critical time window of juvenile adult brain development that is essential in establishing neuronal circuits that are required for learning and memory.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted September 25, 2018.
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Identification of SMARCD1 as a syndromic intellectual disability gene that is required for memory and context-dependent regulation of neuronal genes in Drosophila
Kevin C.J. Nixon, Justine Rousseau, Max H. Stone, Mohammed Sarikahya, Sophie Ehresmann, Seiji Mizuno, Naomichi Matsumoto, Noriko Miyake, DDD study
bioRxiv 422188; doi: https://doi.org/10.1101/422188
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Identification of SMARCD1 as a syndromic intellectual disability gene that is required for memory and context-dependent regulation of neuronal genes in Drosophila
Kevin C.J. Nixon, Justine Rousseau, Max H. Stone, Mohammed Sarikahya, Sophie Ehresmann, Seiji Mizuno, Naomichi Matsumoto, Noriko Miyake, DDD study
bioRxiv 422188; doi: https://doi.org/10.1101/422188

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