Automated optimized parameters for t-distributed stochastic neighbor embedding improve visualization and allow analysis of large datasets

Anna C. Belkina; Christopher O. Ciccolella; Rina Anno; Richard Halpert; Josef Spidlen; Jennifer E. Snyder-Cappione

doi:10.1101/451690

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Automated optimized parameters for t-distributed stochastic neighbor embedding improve visualization and allow analysis of large datasets

View ORCID ProfileAnna C. Belkina, Christopher O. Ciccolella, Rina Anno, View ORCID ProfileRichard Halpert, View ORCID ProfileJosef Spidlen, View ORCID ProfileJennifer E. Snyder-Cappione

doi: https://doi.org/10.1101/451690

Anna C. Belkina

1Department of Pathology, Boston University School of Medicine, Boston, MA

2Flow Cytometry Core Facility and Boston University School of Medicine, Boston, MA

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ORCID record for Anna C. Belkina
For correspondence: belkina@bu.edu

Christopher O. Ciccolella

4Omiq, Inc, Santa Clara, CA

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Rina Anno

5Department of Mathematics, Kansas State University, Manhattan, KS

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Richard Halpert

6BD Life Sciences – FlowJo, Ashland, OR

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Josef Spidlen

6BD Life Sciences – FlowJo, Ashland, OR

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Jennifer E. Snyder-Cappione

2Flow Cytometry Core Facility and Boston University School of Medicine, Boston, MA

3Department of Microbiology, Boston University School of Medicine, Boston, MA

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ORCID record for Jennifer E. Snyder-Cappione

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Posted May 17, 2019.

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Automated optimized parameters for t-distributed stochastic neighbor embedding improve visualization and allow analysis of large datasets

Anna C. Belkina, Christopher O. Ciccolella, Rina Anno, Richard Halpert, Josef Spidlen, Jennifer E. Snyder-Cappione

bioRxiv 451690; doi: https://doi.org/10.1101/451690

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Automated optimized parameters for t-distributed stochastic neighbor embedding improve visualization and allow analysis of large datasets

Anna C. Belkina, Christopher O. Ciccolella, Rina Anno, Richard Halpert, Josef Spidlen, Jennifer E. Snyder-Cappione

bioRxiv 451690; doi: https://doi.org/10.1101/451690

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