Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Quantitative Analysis Reveals Reciprocal Regulations Underlying Recovery Dynamics of Thymocytes and Thymic Environment

View ORCID ProfileKazumasa B. Kaneko, Ryosuke Tateishi, Takahisa Miyao, Nobuko Akiyama, Ryo Yokota, Taishin Akiyama, Tetsuya J. Kobayashi
doi: https://doi.org/10.1101/478164
Kazumasa B. Kaneko
aGraduate School of Engineering, the University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Kazumasa B. Kaneko
Ryosuke Tateishi
bRIKEN Center for Integrative Medical Sciences, Kanagawa 230-0045, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Takahisa Miyao
bRIKEN Center for Integrative Medical Sciences, Kanagawa 230-0045, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Nobuko Akiyama
bRIKEN Center for Integrative Medical Sciences, Kanagawa 230-0045, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Ryo Yokota
cInstitute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro-ku 153-8505, Tokyo, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Taishin Akiyama
bRIKEN Center for Integrative Medical Sciences, Kanagawa 230-0045, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: taishin.akiyama@riken.jp tetsuya@mail.crmind.net
Tetsuya J. Kobayashi
aGraduate School of Engineering, the University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan
cInstitute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro-ku 153-8505, Tokyo, Japan
dPREST, Japan Science and Technology Agency (JST), 4-1-8 Honcho Kawaguchi, Saitama 332-0012, Japan
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: taishin.akiyama@riken.jp tetsuya@mail.crmind.net
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

Thymic crosstalk, a set of reciprocal regulations between thymocytes and thymic environment, is relevant for orchestrating the appropriate development of thymocytes as well as the recovery of the thymus from various exogenous insults. Nevertheless, the dynamic and regulatory aspects of the thymic crosstalk have not yet been clarified. In this work, we inferred the interactions shaping the thymic crosstalk and its resultant dynamics between the thymocytes and the thymic epithelial cells (TECs) by quantitative analysis and modelling of the recovery dynamics induced by irradiation. The analysis identified regulatory interactions consistent with the known molecular evidence and revealed their dynamic roles in the recovery process. Moreover, the analysis also predicted, and a subsequent experiment verified a new regulation of CD4+CD8+ double positive (DP) thymocytes, which temporarily increases their proliferation rate upon the decrease in their population size. Our model established the pivotal step towards a dynamic understanding of the thymic crosstalk as a regulatory network system.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
Back to top
PreviousNext
Posted November 26, 2018.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Quantitative Analysis Reveals Reciprocal Regulations Underlying Recovery Dynamics of Thymocytes and Thymic Environment
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Quantitative Analysis Reveals Reciprocal Regulations Underlying Recovery Dynamics of Thymocytes and Thymic Environment
Kazumasa B. Kaneko, Ryosuke Tateishi, Takahisa Miyao, Nobuko Akiyama, Ryo Yokota, Taishin Akiyama, Tetsuya J. Kobayashi
bioRxiv 478164; doi: https://doi.org/10.1101/478164
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
Quantitative Analysis Reveals Reciprocal Regulations Underlying Recovery Dynamics of Thymocytes and Thymic Environment
Kazumasa B. Kaneko, Ryosuke Tateishi, Takahisa Miyao, Nobuko Akiyama, Ryo Yokota, Taishin Akiyama, Tetsuya J. Kobayashi
bioRxiv 478164; doi: https://doi.org/10.1101/478164

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Immunology
Subject Areas
All Articles
  • Animal Behavior and Cognition (4122)
  • Biochemistry (8831)
  • Bioengineering (6536)
  • Bioinformatics (23493)
  • Biophysics (11818)
  • Cancer Biology (9235)
  • Cell Biology (13350)
  • Clinical Trials (138)
  • Developmental Biology (7453)
  • Ecology (11431)
  • Epidemiology (2066)
  • Evolutionary Biology (15183)
  • Genetics (10458)
  • Genomics (14057)
  • Immunology (9193)
  • Microbiology (22222)
  • Molecular Biology (8833)
  • Neuroscience (47670)
  • Paleontology (352)
  • Pathology (1432)
  • Pharmacology and Toxicology (2493)
  • Physiology (3741)
  • Plant Biology (8098)
  • Scientific Communication and Education (1438)
  • Synthetic Biology (2226)
  • Systems Biology (6046)
  • Zoology (1258)