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Neocortical layer 4 in adult mouse differs in major cell types and circuit organization between primary sensory areas

Scala F., View ORCID ProfileD. Kobak, F. Scala, Y. Bernaerts, S. Laturnus, View ORCID ProfileC.R. Cadwell, L. Hartmanis, J. Castro, Z.H. Tan, View ORCID ProfileR. Sandberg, View ORCID ProfileP. Berens, View ORCID ProfileX. Jiang, View ORCID ProfileA.S. Tolias
doi: https://doi.org/10.1101/507293
Scala F.
1Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
2Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA
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D. Kobak
3Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
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  • ORCID record for D. Kobak
F. Scala
1Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
2Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA
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Y. Bernaerts
3Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
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S. Laturnus
3Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
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C.R. Cadwell
4Department of Anatomic Pathology, University of California San Francisco, San Francisco, CA, USA
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L. Hartmanis
5Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden
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J. Castro
1Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
2Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA
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Z.H. Tan
1Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
2Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA
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R. Sandberg
5Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden
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P. Berens
3Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
6Department of Computer Science, University of Tübingen, Tübingen, Germany
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X. Jiang
1Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
2Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA
7Jan and Dan Duncan Neurological Research Institute at Texas Children’s Hospital, Houston
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A.S. Tolias
1Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
2Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, Texas, USA
8Department of Electrical and Computational Engineering, Rice University, Houston, Texas, USA
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Abstract

Layer 4 (L4) of mammalian neocortex plays a crucial role in cortical information processing, yet a complete census of its cell types and connectivity remains elusive. Using whole-cell recordings with morphological recovery, we identified one major excitatory and seven inhibitory types of neurons in L4 of adult mouse visual cortex (V1). Nearly all excitatory neurons were pyramidal and almost all Somatostatin-positive (SOM+) neurons were Martinotti cells. In contrast, in somatosensory cortex (S1), excitatory cells were mostly stellate and SOM+ cells were non-Martinotti. These morphologically distinct SOM+ interneurons correspond to different transcriptomic cell types and are differentially integrated into the local circuit with only S1 cells receiving local excitatory input. Our results challenge the classical view of a canonical microcircuit repeated through the neocortex. Instead we propose that cell-type specific circuit motifs, such as the Martinotti/pyramidal pair, are optionally used across the cortex as building blocks to assemble cortical circuits.

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Posted December 27, 2018.
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Neocortical layer 4 in adult mouse differs in major cell types and circuit organization between primary sensory areas
Scala F., D. Kobak, F. Scala, Y. Bernaerts, S. Laturnus, C.R. Cadwell, L. Hartmanis, J. Castro, Z.H. Tan, R. Sandberg, P. Berens, X. Jiang, A.S. Tolias
bioRxiv 507293; doi: https://doi.org/10.1101/507293
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Neocortical layer 4 in adult mouse differs in major cell types and circuit organization between primary sensory areas
Scala F., D. Kobak, F. Scala, Y. Bernaerts, S. Laturnus, C.R. Cadwell, L. Hartmanis, J. Castro, Z.H. Tan, R. Sandberg, P. Berens, X. Jiang, A.S. Tolias
bioRxiv 507293; doi: https://doi.org/10.1101/507293

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