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The proteome of Tetrasphaera elongata is adapted to changing conditions in wastewater treatment plants

View ORCID ProfileFlorian-Alexander Herbst, View ORCID ProfileMorten S. Dueholm, View ORCID ProfileReinhard Wimmer, View ORCID ProfilePer Halkjær Nielsen
doi: https://doi.org/10.1101/513143
Florian-Alexander Herbst
aCenter for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
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Morten S. Dueholm
aCenter for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
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Reinhard Wimmer
aCenter for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
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Per Halkjær Nielsen
aCenter for Microbial Communities, Department of Chemistry and Bioscience, Aalborg University, Aalborg, Denmark
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  • For correspondence: phn@bio.aau.dk
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Abstract

The activated sludge in wastewater treatment plants (WWTP) designed for enhanced biological phosphorus removal (EBPR) experiences periodically changing nutrient and oxygen availability. Tetrasphaera is the most abundant genus in Danish WWTP and represents up to 20–30% of the activated sludge community based on 16S rRNA amplicon sequencing and quantitative fluorescence in situ hybridization analyses, although the genus is in low abundance in the influent wastewater. Here we investigated how Tetrasphaera can successfully out-compete most other microorganisms in such highly dynamic ecosystems. To achive this, we analyzed the physiological adaptations of the WWTP isolate T. elongata str. LP2 during an aerobic to anoxic shift by label-free quantitative proteomics and NMR-metabolomics. Escherichia coli was used as reference organism as it shares several metabolic capabilities and is regularly introduced to wastewater treatment plants, but without succeeding there. When compared to E. coli, only minor changes in the proteome of T. elongata were observed after the switch to anoxic conditions. This indicates that metabolic pathways for anaerobic energy harvest were already expressed during the aerobic growth. This allows continuous growth of Tetrasphaera immediately after the switch to anoxic conditions. Metabolomics furthermore revealed that the substrates provided were exploited far more efficiently by Tetrasphaera than by E. coli. These results suggest that T. elongata prospers in the dynamic WWTP environment due to adaptation to the changing environmental conditions.

Significance of the study Members of the genus Tetrasphaera are widely distributed and highly abundant in most well-operating WWTPs with EBPR configuration. However, despite their high abundance in situ, little is known about their physiology and ecological role. Although the importance of Tetrasphaera in engineered wastewater treatment systems is slowly being recognized, additional information is needed to understand the full extent of functions the microorganisms have in many of the essential biological processes in the WWTP. Such information may improve available process models and ultimately lead to better wastewater treatment as well as resource recovery. This study supplies proteomic and metabolomic data on the aerobic/anoxic adaptation of Tetrasphaera and provides a hypothesis on how Tetrasphaera might compete in dynamic engineered systems.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted April 19, 2019.
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The proteome of Tetrasphaera elongata is adapted to changing conditions in wastewater treatment plants
Florian-Alexander Herbst, Morten S. Dueholm, Reinhard Wimmer, Per Halkjær Nielsen
bioRxiv 513143; doi: https://doi.org/10.1101/513143
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The proteome of Tetrasphaera elongata is adapted to changing conditions in wastewater treatment plants
Florian-Alexander Herbst, Morten S. Dueholm, Reinhard Wimmer, Per Halkjær Nielsen
bioRxiv 513143; doi: https://doi.org/10.1101/513143

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