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Chicdiff: a computational pipeline for detecting differential chromosomal interactions in Capture Hi-C data

Jonathan Cairns, William R. Orchard, Valeriya Malysheva, Mikhail Spivakov
doi: https://doi.org/10.1101/526269
Jonathan Cairns
1Regulatory Genomics Group, Nuclear Dynamics Programme, Babraham Institute, Cambridge CB22 3AT, UK
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William R. Orchard
1Regulatory Genomics Group, Nuclear Dynamics Programme, Babraham Institute, Cambridge CB22 3AT, UK
2Functional Gene Control Group, Epigenetics Section, MRC London Institute of Medical Sciences, London W12 0NN, UK
3Institute of Clinical Sciences, Faculty of Medicine, Imperial College, London W12 0NN, UK
4University of Cambridge, Cambridge CB2 1TN, UK
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Valeriya Malysheva
1Regulatory Genomics Group, Nuclear Dynamics Programme, Babraham Institute, Cambridge CB22 3AT, UK
2Functional Gene Control Group, Epigenetics Section, MRC London Institute of Medical Sciences, London W12 0NN, UK
3Institute of Clinical Sciences, Faculty of Medicine, Imperial College, London W12 0NN, UK
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Mikhail Spivakov
1Regulatory Genomics Group, Nuclear Dynamics Programme, Babraham Institute, Cambridge CB22 3AT, UK
2Functional Gene Control Group, Epigenetics Section, MRC London Institute of Medical Sciences, London W12 0NN, UK
3Institute of Clinical Sciences, Faculty of Medicine, Imperial College, London W12 0NN, UK
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  • For correspondence: mikhail.spivakov@lms.mrc.ac.uk
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Posted January 22, 2019.
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Chicdiff: a computational pipeline for detecting differential chromosomal interactions in Capture Hi-C data
Jonathan Cairns, William R. Orchard, Valeriya Malysheva, Mikhail Spivakov
bioRxiv 526269; doi: https://doi.org/10.1101/526269
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Chicdiff: a computational pipeline for detecting differential chromosomal interactions in Capture Hi-C data
Jonathan Cairns, William R. Orchard, Valeriya Malysheva, Mikhail Spivakov
bioRxiv 526269; doi: https://doi.org/10.1101/526269

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