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Capturing cell type-specific chromatin structural patterns by applying topic modeling to single-cell Hi-C data
Hyeon-Jin Kim, Galip Gürkan Yardımcı, Giancarlo Bonora, Vijay Ramani, Jie Liu, Ruolan Qiu, Choli Lee, Jennifer Hesson, Carol B. Ware, Jay Shendure, Zhijun Duan, William Stafford Noble
doi: https://doi.org/10.1101/534800
Hyeon-Jin Kim
1Department of Genome Sciences, University of Washington
Galip Gürkan Yardımcı
1Department of Genome Sciences, University of Washington
Giancarlo Bonora
1Department of Genome Sciences, University of Washington
Vijay Ramani
1Department of Genome Sciences, University of Washington
2Department of Biochemistry and Biophysics, University of California San Francisco
Jie Liu
3Department of Computational Medicine and Bioinformatics, University of Michigan
Ruolan Qiu
1Department of Genome Sciences, University of Washington
Choli Lee
1Department of Genome Sciences, University of Washington
Jennifer Hesson
4Department of Comparative Medicine, University of Washington
6Institute for Stem Cell and Regenerative Medicine, University of Washington
Carol B. Ware
4Department of Comparative Medicine, University of Washington
6Institute for Stem Cell and Regenerative Medicine, University of Washington
Jay Shendure
1Department of Genome Sciences, University of Washington
Zhijun Duan
5Division of Hematology, Department of Medicine, University of Washington
6Institute for Stem Cell and Regenerative Medicine, University of Washington
William Stafford Noble
1Department of Genome Sciences, University of Washington
7Paul G. Allen School of Computer Science & Engineering, University of Washington
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Posted November 18, 2019.
Capturing cell type-specific chromatin structural patterns by applying topic modeling to single-cell Hi-C data
Hyeon-Jin Kim, Galip Gürkan Yardımcı, Giancarlo Bonora, Vijay Ramani, Jie Liu, Ruolan Qiu, Choli Lee, Jennifer Hesson, Carol B. Ware, Jay Shendure, Zhijun Duan, William Stafford Noble
bioRxiv 534800; doi: https://doi.org/10.1101/534800
Capturing cell type-specific chromatin structural patterns by applying topic modeling to single-cell Hi-C data
Hyeon-Jin Kim, Galip Gürkan Yardımcı, Giancarlo Bonora, Vijay Ramani, Jie Liu, Ruolan Qiu, Choli Lee, Jennifer Hesson, Carol B. Ware, Jay Shendure, Zhijun Duan, William Stafford Noble
bioRxiv 534800; doi: https://doi.org/10.1101/534800
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