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Global variability of the human IgG glycome

Jerko Stambuk, Natali Nakic, Frano Vuckovic, Maja Pucic-Bakovic, Genadij Razdorov, Irena Trbojevic-Akmacic, Mislav Novokmet, Toma Keser, Marija Vilaj, Tamara Pavic, Ivan Gudelj, Mirna Simurina, Manshu Song, Hao Wang, Marijana Pericic Salihovic, Harry Campbell, Igor Rudan, Ivana Kolcic, Leigh Anne Eller, Paul McKeigue, Merlin L. Robb, Jonas Halfvarson, Metin Kurtoglu, Vito Annese, Tatjana Skaric-Juric, Mariam Molokhia, Ozren Polasek, Caroline Hayward, Hannah Kibuuka, Kujtim Thaqi, Christian Gieger, Sorachai Nitayaphan, Tim Spector, Youxin Wang, Therese Tillin, Nish Chaturvedi, James F. Wilson, Moses Schanfield, Maxim Filipenko, Wei Wang, Gordan Lauc
doi: https://doi.org/10.1101/535237
Jerko Stambuk
Genos;
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  • For correspondence: jstambuk@genos.hr
Natali Nakic
Scuola Internazionale Superiore di Studi Avanzati, Trieste, Italy;
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Frano Vuckovic
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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Maja Pucic-Bakovic
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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Genadij Razdorov
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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Irena Trbojevic-Akmacic
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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Mislav Novokmet
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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Toma Keser
Faculty of Pharmacy and Biochemistry, University of Zagreb, Zagreb, Croatia;
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Marija Vilaj
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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  • For correspondence: mvilaj@genos.hr
Tamara Pavic
Faculty of Pharmacy and Biochemistry, University of Zagreb, Zagreb, Croatia;
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  • For correspondence: tpavic@unizg.hr
Ivan Gudelj
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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Mirna Simurina
Faculty of Pharmacy and Biochemistry, University of Zagreb, Zagreb, Croatia;
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Manshu Song
Capital Medical University, Beijing, China;
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Hao Wang
Capital Medical University, Beijing, China;
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Marijana Pericic Salihovic
Institute for Anthropological Research, Zagreb, Croatia;
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Harry Campbell
The University of Edinburgh, Edinburgh, United Kingdom;
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Igor Rudan
The University of Edinburgh, Edinburgh, United Kingdom;
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Ivana Kolcic
School of Medicine, University of Split, Split, Croatia;
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Leigh Anne Eller
Walter Reed Army Institute of Research, Silver Spring, Maryland, USA;
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Paul McKeigue
The University of Edinburgh, Edinburgh, United Kingdom;
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Merlin L. Robb
Walter Reed Army Institute of Research, Silver Spring, Maryland, USA;
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Jonas Halfvarson
Faculty of Medicine and Health, Orebro University, Orebro, Sweden;
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Metin Kurtoglu
Department of Oncology, Koc University School of Medicine, Istanbul, Turkey;
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Vito Annese
Careggi University Hospital, Florence, Italy;
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Tatjana Skaric-Juric
Institute for Anthropological Research, Zagreb, Croatia;
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Mariam Molokhia
King's College London, London, United Kingdom;
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Ozren Polasek
School of Medicine, University of Split, Split, Croatia;
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Caroline Hayward
University of Edinburgh, Edinburgh, United Kingdom;
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Hannah Kibuuka
Makerere University Walter Reed Project, Kampala, Uganda;
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Kujtim Thaqi
Institute of Clinical Biochemistry, Pristina, Kosovo;
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Christian Gieger
Helmholtz Zentrum Munchen - German Research Center for Environmental Health, Neuherberg, Germany;
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Sorachai Nitayaphan
Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand;
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Tim Spector
King's College London, London, United Kingdom;
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Youxin Wang
Capital Medical University, Beijing, China;
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Therese Tillin
Faculty of Population Health Sciences, London, United Kingdom;
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Nish Chaturvedi
Faculty of Population Health Sciences, London, United Kingdom;
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James F. Wilson
The University of Edinburgh, Edinburgh, United Kingdom;
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Moses Schanfield
George Washington University, Washington, DC, USA;
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Maxim Filipenko
Institute of Chemical Biology and Fundamental Medicine, Novosibirsk, Russia
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Wei Wang
Capital Medical University, Beijing, China;
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Gordan Lauc
Genos Glycoscience Research Laboratory, Zagreb, Croatia;
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  • For correspondence: glauc@pharma.hr
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Abstract

Immunoglobulin G (IgG) is the most abundant serum antibody and is a key determinant of humoral immune response. Its structural characteristics and effector functions are modulated through the attachment of various sugar moieties called glycans. IgG N-glycome patterns change with the age of individual and in different diseases. Variability of IgG glycosylation within a population is well studied and is affected by a combination of genetic and environmental factors. However, global inter-population differences in IgG glycosylation have never been properly addressed. Here we present population-specific N-glycosylation patterns of whole IgG, analysed in 5 different populations totalling 10,482 IgG glycomes, and of IgG fragment crystallisable region (Fc), analysed in 2,530 samples from 27 populations sampled across the world. We observed that country of residence associates with many N-glycan features and is a strong predictor of monogalactosylation variability. IgG galactosylation also strongly correlated with the development level of a country, defined by United Nations health and socioeconomic development indicators. We found that subjects from developing countries had low IgG galactosylation levels, characteristic for inflammation and ageing. Our results suggest that citizens of developing countries may be exposed to country-specific environmental factors that can cause low-grade chronic inflammation and the apparent increase in biological age.

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Posted February 01, 2019.
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Global variability of the human IgG glycome
Jerko Stambuk, Natali Nakic, Frano Vuckovic, Maja Pucic-Bakovic, Genadij Razdorov, Irena Trbojevic-Akmacic, Mislav Novokmet, Toma Keser, Marija Vilaj, Tamara Pavic, Ivan Gudelj, Mirna Simurina, Manshu Song, Hao Wang, Marijana Pericic Salihovic, Harry Campbell, Igor Rudan, Ivana Kolcic, Leigh Anne Eller, Paul McKeigue, Merlin L. Robb, Jonas Halfvarson, Metin Kurtoglu, Vito Annese, Tatjana Skaric-Juric, Mariam Molokhia, Ozren Polasek, Caroline Hayward, Hannah Kibuuka, Kujtim Thaqi, Christian Gieger, Sorachai Nitayaphan, Tim Spector, Youxin Wang, Therese Tillin, Nish Chaturvedi, James F. Wilson, Moses Schanfield, Maxim Filipenko, Wei Wang, Gordan Lauc
bioRxiv 535237; doi: https://doi.org/10.1101/535237
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Global variability of the human IgG glycome
Jerko Stambuk, Natali Nakic, Frano Vuckovic, Maja Pucic-Bakovic, Genadij Razdorov, Irena Trbojevic-Akmacic, Mislav Novokmet, Toma Keser, Marija Vilaj, Tamara Pavic, Ivan Gudelj, Mirna Simurina, Manshu Song, Hao Wang, Marijana Pericic Salihovic, Harry Campbell, Igor Rudan, Ivana Kolcic, Leigh Anne Eller, Paul McKeigue, Merlin L. Robb, Jonas Halfvarson, Metin Kurtoglu, Vito Annese, Tatjana Skaric-Juric, Mariam Molokhia, Ozren Polasek, Caroline Hayward, Hannah Kibuuka, Kujtim Thaqi, Christian Gieger, Sorachai Nitayaphan, Tim Spector, Youxin Wang, Therese Tillin, Nish Chaturvedi, James F. Wilson, Moses Schanfield, Maxim Filipenko, Wei Wang, Gordan Lauc
bioRxiv 535237; doi: https://doi.org/10.1101/535237

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