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Optimal biochemical information processing at criticality

Angel Stanoev, Akhilesh P. Nandan, Aneta Koseska
doi: https://doi.org/10.1101/543348
Angel Stanoev
Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
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Akhilesh P. Nandan
Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
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Aneta Koseska
Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Dortmund, Germany
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  • For correspondence: aneta.koseska@mpi-dortmund.mpg.de
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Abstract

How cells utilize surface receptors for chemoreception is a recurrent question spanning between physics and biology over the past few decades. However, the dynamical mechanism for processing time-varying signals is still unclear. Using dynamical systems formalism to describe criticality in non-equilibrium systems, we propose generic principle for temporal information processing through phase-space trajectories using dynamic transient memory. In contrast to short-term memory, dynamic memory generated via ghost attractor enables signal integration depending on stimulus history, and thus balance between stability and plasticity in receptor responses. We propose that self-organization at criticality can arise through fluctuation-sensing mechanism, illustrated for the experimentally established epidermal growth factor sensing system. This framework applies irrespective of the intrinsic node dynamics or network size, as we show using also a basic neuronal model. Processing of non-stationary signals, a feature previously attributed only to neuronal networks, thus uniquely emerges for biochemical networks organized at criticality.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted February 08, 2019.
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Optimal biochemical information processing at criticality
Angel Stanoev, Akhilesh P. Nandan, Aneta Koseska
bioRxiv 543348; doi: https://doi.org/10.1101/543348
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Optimal biochemical information processing at criticality
Angel Stanoev, Akhilesh P. Nandan, Aneta Koseska
bioRxiv 543348; doi: https://doi.org/10.1101/543348

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