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Measuring individual identity information in animal signals: Overview and performance of available identity metrics

View ORCID ProfilePavel Linhart, Tomasz Osiejuk, Michal Budka, Martin Šálek, Marek Špinka, Richard Policht, Michaela Syrová, Daniel T. Blumstein
doi: https://doi.org/10.1101/546143
Pavel Linhart
1Department of Behavioural Ecology, Adam Mickiewicz University, Umultowska 89, 61-614, Poznan, Poland
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Tomasz Osiejuk
1Department of Behavioural Ecology, Adam Mickiewicz University, Umultowska 89, 61-614, Poznan, Poland
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Michal Budka
1Department of Behavioural Ecology, Adam Mickiewicz University, Umultowska 89, 61-614, Poznan, Poland
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Martin Šálek
2The Czech Academy of Sciences, Institute of Vertebrate Biology, Květná 8, 603 65 Brno, Czech Republic
3Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Kamýcká 1176, Suchdol, 16521 Prague, Czech Republic
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Marek Špinka
4Department of Ethology, Institute of Animal Science, Přátelství 815, Prague, Uhříněves, 104 00, Czech Republic
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Richard Policht
4Department of Ethology, Institute of Animal Science, Přátelství 815, Prague, Uhříněves, 104 00, Czech Republic
5Department of Game Management and Wildlife Biology, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, Kamýcká 129, 165 21 Prague 6, Czech Republic
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Michaela Syrová
4Department of Ethology, Institute of Animal Science, Přátelství 815, Prague, Uhříněves, 104 00, Czech Republic
6Department of Zoology, Faculty of Sciences, University of South Bohemia, Branišovská 31a, České Budějovice, 370 05, Czech Republic
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Daniel T. Blumstein
7Department of Ecology and Evolutionary Biology, University of California, 621 Young Drive South, Los Angeles, CA 90095-1606, USA
8Rocky Mountain Biological Laboratory, Box 516, Crested Butte, CO 81224, USA
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Abstract

  1. Identity signals have been studied for over 50 years but there is no consensus as to how to quantify individuality. While there are a variety of different metrics to quantify individual identity, or individuality, these methods remain un-validated and the relationships between them unclear.

  2. We contrasted three univariate and four multivariate metrics (and their different computational variants) and evaluated their performance on simulated and empirical datasets.

  3. Of the metrics examined, Beecher’s information statistic (HS) was the best one and could easily and reliably be converted into the commonly used discrimination score (and vice versa) after accounting for the number of individuals and calls per individual in a given dataset. Although Beecher’s information statistic is not entirely independent of sampling parameters, this problem can be removed by reducing the number of parameters or by increasing the number of individuals.

  4. Because it is easily calculated, has superior performance, can be used to describe single variables or signal as a whole, and because it tells us the maximum number of individuals that can be discriminated given a set of measurements, we recommend that individuality should be quantified using Beecher’s information statistic.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted February 10, 2019.
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Measuring individual identity information in animal signals: Overview and performance of available identity metrics
Pavel Linhart, Tomasz Osiejuk, Michal Budka, Martin Šálek, Marek Špinka, Richard Policht, Michaela Syrová, Daniel T. Blumstein
bioRxiv 546143; doi: https://doi.org/10.1101/546143
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Measuring individual identity information in animal signals: Overview and performance of available identity metrics
Pavel Linhart, Tomasz Osiejuk, Michal Budka, Martin Šálek, Marek Špinka, Richard Policht, Michaela Syrová, Daniel T. Blumstein
bioRxiv 546143; doi: https://doi.org/10.1101/546143

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