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Using the NCBI AMRFinder Tool to Determine Antimicrobial Resistance Genotype-Phenotype Correlations Within a Collection of NARMS Isolates

Michael Feldgarden, Vyacheslav Brover, Daniel H. Haft, Arjun B. Prasad, Douglas J. Slotta, Igor Tolstoy, Gregory H. Tyson, Shaohua Zhao, Chih-Hao Hsu, Patrick F. McDermott, Daniel A. Tadesse, Cesar Morales, Mustafa Simmons, Glenn Tillman, Jamie Wasilenko, Jason P. Folster, William Klimke
doi: https://doi.org/10.1101/550707
Michael Feldgarden
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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  • For correspondence: michael.feldgarden@nih.gov
Vyacheslav Brover
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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Daniel H. Haft
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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Arjun B. Prasad
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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Douglas J. Slotta
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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Igor Tolstoy
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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Gregory H. Tyson
bFood and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, MD
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Shaohua Zhao
bFood and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, MD
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Chih-Hao Hsu
bFood and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, MD
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Patrick F. McDermott
bFood and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, MD
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Daniel A. Tadesse
bFood and Drug Administration, Center for Veterinary Medicine, Office of Research, Laurel, MD
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Cesar Morales
cUSDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, GA
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Mustafa Simmons
cUSDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, GA
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Glenn Tillman
cUSDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, GA
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Jamie Wasilenko
cUSDA Food Safety and Inspection Service, Office of Public Health Science, Eastern Laboratory, Athens, GA
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Jason P. Folster
dEnteric Diseases Laboratory Branch, Centers for Disease Control and Prevention, Atlanta, GA
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William Klimke
aNational Center for Biological Information, National Library of Medicine, National Institutes of Health, Bethesda, MD
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Posted February 15, 2019.
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Using the NCBI AMRFinder Tool to Determine Antimicrobial Resistance Genotype-Phenotype Correlations Within a Collection of NARMS Isolates
Michael Feldgarden, Vyacheslav Brover, Daniel H. Haft, Arjun B. Prasad, Douglas J. Slotta, Igor Tolstoy, Gregory H. Tyson, Shaohua Zhao, Chih-Hao Hsu, Patrick F. McDermott, Daniel A. Tadesse, Cesar Morales, Mustafa Simmons, Glenn Tillman, Jamie Wasilenko, Jason P. Folster, William Klimke
bioRxiv 550707; doi: https://doi.org/10.1101/550707
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Using the NCBI AMRFinder Tool to Determine Antimicrobial Resistance Genotype-Phenotype Correlations Within a Collection of NARMS Isolates
Michael Feldgarden, Vyacheslav Brover, Daniel H. Haft, Arjun B. Prasad, Douglas J. Slotta, Igor Tolstoy, Gregory H. Tyson, Shaohua Zhao, Chih-Hao Hsu, Patrick F. McDermott, Daniel A. Tadesse, Cesar Morales, Mustafa Simmons, Glenn Tillman, Jamie Wasilenko, Jason P. Folster, William Klimke
bioRxiv 550707; doi: https://doi.org/10.1101/550707

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