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A Synergistic Anti-Cancer FAK and HDAC Inhibitor Combination Discovered by a Novel Chemical-Genetic High-Content Phenotypic Screen

John C. Dawson, View ORCID ProfileBryan Serrels, Adam Byron, Morwenna Muir, Ashraff Makda, Amaya García-Muñoz, Alex von Kriegsheim, Neil O. Carragher, View ORCID ProfileMargaret C. Frame
doi: https://doi.org/10.1101/590802
John C. Dawson
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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Bryan Serrels
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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Adam Byron
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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Morwenna Muir
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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Ashraff Makda
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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Amaya García-Muñoz
2Systems Biology Ireland, University College Dublin, Dublin, Ireland
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Alex von Kriegsheim
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
2Systems Biology Ireland, University College Dublin, Dublin, Ireland
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Neil O. Carragher
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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  • For correspondence: m.frame@ed.ac.uk n.carragher@ed.ac.uk
Margaret C. Frame
1Cancer Research UK Edinburgh Centre, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom
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  • ORCID record for Margaret C. Frame
  • For correspondence: m.frame@ed.ac.uk n.carragher@ed.ac.uk
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Abstract

We mutated the Focal Adhesion Kinase (FAK) catalytic domain to inhibit binding of the chaperone, Cdc37 and ATP, mimicking the actions of a FAK kinase inhibitor. We re-expressed mutant and wild-type FAK in squamous cell carcinoma (SCC) cells from which endogenous FAK had been deleted, genetically fixing one axis of a FAK inhibitor combination high-content phenotypic screen to discover drugs that may synergize with FAK inhibitors. HDAC inhibitors represented the major class of compounds that potently induced multi-parametric phenotypic changes when FAK was rendered kinase-defective, or inhibited pharmacologically in SCC cells. Indeed, combined FAK and HDAC inhibitors arrest proliferation and induce apoptosis in a sub-set of cancer cell lines in vitro and efficiently inhibits tumor growth in vivo. Mechanistically, HDAC inhibitors potentiate inhibitor-induced FAK inactivation and reverses FAK-associated nuclear YAP in sensitive cancer cell lines. Here we report the discovery of a new clinically actionable synergistic combination between FAK and HDAC inhibitors.

Significance We describe a chemical-genetic, high-content phenotypic screening approach to discover effective anti-cancer combinations of targeted therapeutics through which we identified a novel, synergistic and clinically actionable, combination of FAK and HDAC inhibitors.

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Posted March 27, 2019.
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A Synergistic Anti-Cancer FAK and HDAC Inhibitor Combination Discovered by a Novel Chemical-Genetic High-Content Phenotypic Screen
John C. Dawson, Bryan Serrels, Adam Byron, Morwenna Muir, Ashraff Makda, Amaya García-Muñoz, Alex von Kriegsheim, Neil O. Carragher, Margaret C. Frame
bioRxiv 590802; doi: https://doi.org/10.1101/590802
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A Synergistic Anti-Cancer FAK and HDAC Inhibitor Combination Discovered by a Novel Chemical-Genetic High-Content Phenotypic Screen
John C. Dawson, Bryan Serrels, Adam Byron, Morwenna Muir, Ashraff Makda, Amaya García-Muñoz, Alex von Kriegsheim, Neil O. Carragher, Margaret C. Frame
bioRxiv 590802; doi: https://doi.org/10.1101/590802

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