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Modern clinical Mycobacterium tuberculosis strains leverage type I IFN pathway for a pro-inflammatory response in the host

View ORCID ProfileDeepthi Shankaran, View ORCID ProfilePrabhakar Arumugam, Ankur Bothra, View ORCID ProfileSheetal Gandotra, View ORCID ProfileVivek Rao
doi: https://doi.org/10.1101/594655
Deepthi Shankaran
1CSIR-Institute of genomics and Integrative Biology, New Delhi-110025, India
2Academy of Scientific and Innovative Research (AcSIR), ACSIR-Human Resource Development Centre, (CSIR-HRDC) Campus, Uttar Pradesh-201 002, India
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Prabhakar Arumugam
1CSIR-Institute of genomics and Integrative Biology, New Delhi-110025, India
2Academy of Scientific and Innovative Research (AcSIR), ACSIR-Human Resource Development Centre, (CSIR-HRDC) Campus, Uttar Pradesh-201 002, India
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Ankur Bothra
3LPD/MPS, NIAID-NIH, Bethesda, MD 20892, USA
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Sheetal Gandotra
1CSIR-Institute of genomics and Integrative Biology, New Delhi-110025, India
2Academy of Scientific and Innovative Research (AcSIR), ACSIR-Human Resource Development Centre, (CSIR-HRDC) Campus, Uttar Pradesh-201 002, India
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Vivek Rao
1CSIR-Institute of genomics and Integrative Biology, New Delhi-110025, India
2Academy of Scientific and Innovative Research (AcSIR), ACSIR-Human Resource Development Centre, (CSIR-HRDC) Campus, Uttar Pradesh-201 002, India
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  • For correspondence: vivek.rao@igib.in
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ABSTRACT

Host phagocytes respond to infections by innate defense mechanisms through metabolic shuffling in order to restrict the invading pathogen. However, this very plasticity of the host provides an ideal platform for pathogen mediated manipulation. By employing the macrophage model of Mtb infection, we identify an important strategy employed by modern clinical lineages in regulating the host immune–metabolism axis. The potent ability of these strains to specifically elicit a strong and early macrophage type I IFN response (in contrast to the protracted response to ancient Mtb), was dependent on an increased ability to localize in acidified phagosomes; this higher transit via acidified compartments is important for stimulation of the DNA dependent signaling in infected macrophages. The augmented IFN signaling provided a positive regulatory loop for enhanced expression of the cellular oxysterol-CH25H which in turn facilitated higher levels of IL6 in macrophages infected with the modern Mtb strains. Requirement of type I IFN signaling in mycobacterial intracellular growth highlights another unique ability of Mtb to manipulate host cell physiology and proinflammatory responses.

Significance Statement Co-evolution with humans has enabled the development of novel adaptive mechanisms for survival in host specific environments in the human TB pathogen-Mtb. We present one such mechanism of modern Mtb strains harnessing the type I IFN immune axis to regulate the host pro-inflammatory response. Our results highlight the use of host intracellular endosomal transit as a mechanism by these strains to ensure a strong type I IFN response in macrophages. We also demonstrate the ability of Mtb to regulate macrophage cholesterol metabolism in order to fine tune the host innate responses. These findings lay the foundation of the future development of a host axis directed intervention strategy against this pathogen.

Footnotes

  • Newer format of figures and write up is now attached

  • Abbreviations

    IFN
    Interferon
    BAF A
    bafilomycin A
    MDM
    monocyte derived macrophages
    Mtb
    Mycobacterium tuberculosis
    BCG
    Bacille Calmette Guerin
    CH25H
    Cholesterol 25-Hydroxylase
    lyso+
    lysotracker positive, L1, L3-Lineage 1,3
  • Copyright 
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    Posted September 02, 2019.
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    Modern clinical Mycobacterium tuberculosis strains leverage type I IFN pathway for a pro-inflammatory response in the host
    Deepthi Shankaran, Prabhakar Arumugam, Ankur Bothra, Sheetal Gandotra, Vivek Rao
    bioRxiv 594655; doi: https://doi.org/10.1101/594655
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    Modern clinical Mycobacterium tuberculosis strains leverage type I IFN pathway for a pro-inflammatory response in the host
    Deepthi Shankaran, Prabhakar Arumugam, Ankur Bothra, Sheetal Gandotra, Vivek Rao
    bioRxiv 594655; doi: https://doi.org/10.1101/594655

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