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Photoactivation of silicon rhodamines via a light-induced protonation

View ORCID ProfileMichelle S. Frei, View ORCID ProfilePhilipp Hoess, View ORCID ProfileMarko Lampe, View ORCID ProfileBianca Nijmeijer, Moritz Kueblbeck, View ORCID ProfileJan Ellenberg, View ORCID ProfileJonas Ries, Stefan Pitsch, Luc Reymond, View ORCID ProfileKai Johnsson
doi: https://doi.org/10.1101/626853
Michelle S. Frei
1Department of Chemical Biology, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
2Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
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  • ORCID record for Michelle S. Frei
Philipp Hoess
3Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
4Collaboration for joint PhD degree between EMBL and Heidelberg University, Faculty of Biosciences
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Marko Lampe
5Advanced Light Microscopy Facility (ALMF), European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
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Bianca Nijmeijer
3Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
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Moritz Kueblbeck
3Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
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Jan Ellenberg
3Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
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Jonas Ries
3Cell Biology and Biophysics Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany
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Stefan Pitsch
6Spirochrome AG, Chalberweidstrasse 4, CH-8260 Stein am Rhein, Switzerland
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Luc Reymond
7Biomolecular Screening Facility, École Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
8National Centre of Competence in Research (NCCR) in Chemical Biology, 1015 Lausanne, Switzerland
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  • For correspondence: johnsson@mr.mpg.de
Kai Johnsson
1Department of Chemical Biology, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
2Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
8National Centre of Competence in Research (NCCR) in Chemical Biology, 1015 Lausanne, Switzerland
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  • For correspondence: johnsson@mr.mpg.de
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Abstract

We present a new type of photoactivatable fluorophore that forms a bright silicon rhodamine derivative through a light-dependent isomerization followed by protonation. In contrast to other photoactivatable fluorophores, no caging groups are required, nor are there any undesired side-products released. Using this photoactivatable fluorophore, we created probes for HaloTag and actin for live-cell single-molecule localization microscopy and single-particle tracking experiments. The unusual mechanism of photoactivation and the fluorophore’s outstanding spectroscopic properties make it a powerful tool for live-cell super-resolution microscopy.

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Posted May 04, 2019.
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Photoactivation of silicon rhodamines via a light-induced protonation
Michelle S. Frei, Philipp Hoess, Marko Lampe, Bianca Nijmeijer, Moritz Kueblbeck, Jan Ellenberg, Jonas Ries, Stefan Pitsch, Luc Reymond, Kai Johnsson
bioRxiv 626853; doi: https://doi.org/10.1101/626853
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Photoactivation of silicon rhodamines via a light-induced protonation
Michelle S. Frei, Philipp Hoess, Marko Lampe, Bianca Nijmeijer, Moritz Kueblbeck, Jan Ellenberg, Jonas Ries, Stefan Pitsch, Luc Reymond, Kai Johnsson
bioRxiv 626853; doi: https://doi.org/10.1101/626853

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