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Selection following gene duplication shapes recent genome evolution in the pea aphid Acyrthosiphon pisum

Rosa Fernández, Marina Marcet-Houben, Fabrice Legeai, Gautier Richard, Stéphanie Robin, Valentin Wucher, Cinta Pegueroles, Toni Gabaldón, Denis Tagu
doi: https://doi.org/10.1101/643544
Rosa Fernández
1Bioinformatics and Genomics Unit, Center for Genomic Regulation, Carrer del Dr. Aiguader 88, 08003 Barcelona, Spain
2Department of Life Sciences, Barcelona Supercomputing Center, Carrer de Jordi Girona 29, 08034 Barcelona, Spain
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Marina Marcet-Houben
1Bioinformatics and Genomics Unit, Center for Genomic Regulation, Carrer del Dr. Aiguader 88, 08003 Barcelona, Spain
2Department of Life Sciences, Barcelona Supercomputing Center, Carrer de Jordi Girona 29, 08034 Barcelona, Spain
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Fabrice Legeai
3IGEPP, INRA, Agrocampus Ouest, Université de Rennes 1, 35653 Le Rheu, France
4INRIA, IRISA, Genscale, Campus Beaulieu, Rennes, France
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Gautier Richard
3IGEPP, INRA, Agrocampus Ouest, Université de Rennes 1, 35653 Le Rheu, France
5Max Planck Institute of Immunobiology and Epigenetics, Stübeweg 51, 79108 Freiburg im Breisgau, Germany
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Stéphanie Robin
3IGEPP, INRA, Agrocampus Ouest, Université de Rennes 1, 35653 Le Rheu, France
6INRIA, IRISA, GenOuest Core Facility, Campus Beaulieu, Rennes, France
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Valentin Wucher
7Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain
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Cinta Pegueroles
1Bioinformatics and Genomics Unit, Center for Genomic Regulation, Carrer del Dr. Aiguader 88, 08003 Barcelona, Spain
2Department of Life Sciences, Barcelona Supercomputing Center, Carrer de Jordi Girona 29, 08034 Barcelona, Spain
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  • For correspondence: cintapq@gmail.com toni.gabaldon.bcn@gmail.com denis.tagu@inra.fr
Toni Gabaldón
1Bioinformatics and Genomics Unit, Center for Genomic Regulation, Carrer del Dr. Aiguader 88, 08003 Barcelona, Spain
2Department of Life Sciences, Barcelona Supercomputing Center, Carrer de Jordi Girona 29, 08034 Barcelona, Spain
8Universitat Pompeu Fabra. 08003 Barcelona, Spain
9Institució Catalana de Recerca i Estudis Avançats (ICREA), Pg. Lluís Companys 23, 08010 Barcelona, Spain
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  • For correspondence: cintapq@gmail.com toni.gabaldon.bcn@gmail.com denis.tagu@inra.fr
Denis Tagu
3IGEPP, INRA, Agrocampus Ouest, Université de Rennes 1, 35653 Le Rheu, France
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  • For correspondence: cintapq@gmail.com toni.gabaldon.bcn@gmail.com denis.tagu@inra.fr
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Article Information

doi 
https://doi.org/10.1101/643544
History 
  • May 21, 2019.

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Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.

Author Information

  1. Rosa Fernández*,1,2,
  2. Marina Marcet-Houben*,1,2,
  3. Fabrice Legeai3,4,
  4. Gautier Richard3,5,
  5. Stéphanie Robin3,6,
  6. Valentin Wucher7,
  7. Cinta Pegueroles−,1,2,#,
  8. Toni Gabaldón−,1,2,8,9,# and
  9. Denis Tagu−,3,#
  1. 1Bioinformatics and Genomics Unit, Center for Genomic Regulation, Carrer del Dr. Aiguader 88, 08003 Barcelona, Spain
  2. 2Department of Life Sciences, Barcelona Supercomputing Center, Carrer de Jordi Girona 29, 08034 Barcelona, Spain
  3. 3IGEPP, INRA, Agrocampus Ouest, Université de Rennes 1, 35653 Le Rheu, France
  4. 4INRIA, IRISA, Genscale, Campus Beaulieu, Rennes, France
  5. 5Max Planck Institute of Immunobiology and Epigenetics, Stübeweg 51, 79108 Freiburg im Breisgau, Germany
  6. 6INRIA, IRISA, GenOuest Core Facility, Campus Beaulieu, Rennes, France
  7. 7Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Dr. Aiguader 88, 08003 Barcelona, Spain
  8. 8Universitat Pompeu Fabra. 08003 Barcelona, Spain
  9. 9Institució Catalana de Recerca i Estudis Avançats (ICREA), Pg. Lluís Companys 23, 08010 Barcelona, Spain
  1. ↵#Corresponding authors: CP, cintapq{at}gmail.com, TG, toni.gabaldon.bcn{at}gmail.com, and DT, denis.tagu{at}inra.fr
  1. ↵* Contributed equally

  2. ↵− Contributed equally and share correspondence

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Selection following gene duplication shapes recent genome evolution in the pea aphid Acyrthosiphon pisum
Rosa Fernández, Marina Marcet-Houben, Fabrice Legeai, Gautier Richard, Stéphanie Robin, Valentin Wucher, Cinta Pegueroles, Toni Gabaldón, Denis Tagu
bioRxiv 643544; doi: https://doi.org/10.1101/643544
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Selection following gene duplication shapes recent genome evolution in the pea aphid Acyrthosiphon pisum
Rosa Fernández, Marina Marcet-Houben, Fabrice Legeai, Gautier Richard, Stéphanie Robin, Valentin Wucher, Cinta Pegueroles, Toni Gabaldón, Denis Tagu
bioRxiv 643544; doi: https://doi.org/10.1101/643544

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