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Single EGF mutants unravel the mechanism for stabilization of Epidermal Growth Factor Receptor (EGFR) system

Stefano Pascarelli, Dalmira Merzhakupova, Gen-Ichiro Uechi, Paola Laurino
doi: https://doi.org/10.1101/677393
Stefano Pascarelli
1Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa 904-0495 Japan.
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Dalmira Merzhakupova
1Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa 904-0495 Japan.
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Gen-Ichiro Uechi
1Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa 904-0495 Japan.
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Paola Laurino
1Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa 904-0495 Japan.
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  • For correspondence: paola.laurino@oist.jp
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Abstract

The Epidermal Growth Factor Receptor (EGFR) is a membrane-anchored tyrosine kinase that is able to respond to multiple extra-cellular stimuli in a selective way. Previous studies have pointed out that the modularity of this system could be carried out by ligand-induced differences in the stability of the dimerized receptor. However, nobody has ever explored this hypothesis by observing the effects of single-mutant ligands so far.

Herein, we generated single mutants after we identified positions responsible of inducing functional divergence among paralog ligands using a newly developed approach. Then, we assessed the mutants’ effects on the receptor by employing a combination of molecular dynamics and experimental techniques. Although having comparable binding affinities for EGFR to the wild type, the mutants induced different responses at both the receptor and the cellular level. This study shows for the first time that a functional transition in EGFR can be imparted with as little as one targeted mutation on the ligand. These results also support the theory of biased signaling in the tyrosine kinase receptor system.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Figure 7 revised

  • https://github.com/oist/DIRpred

  • Abbreviations

    EGF
    Epidermal Growth Factor
    EGFR
    Epidermal Growth Factor Receptor
    PPI
    Protein-Protein Interaction
    MSA
    Multiple Sequence Alignment
    MSTA
    Multiple STructural Alignment
    ITC
    Isothermal Titration Calorimetry
    DMEM
    Dulbecco’s Modified Eagle Medium
    ECD
    Extra Cellular Domain
    WT
    Wild Type
    CD
    circular dichroism
  • Copyright 
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    Posted August 24, 2020.
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    Single EGF mutants unravel the mechanism for stabilization of Epidermal Growth Factor Receptor (EGFR) system
    Stefano Pascarelli, Dalmira Merzhakupova, Gen-Ichiro Uechi, Paola Laurino
    bioRxiv 677393; doi: https://doi.org/10.1101/677393
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    Single EGF mutants unravel the mechanism for stabilization of Epidermal Growth Factor Receptor (EGFR) system
    Stefano Pascarelli, Dalmira Merzhakupova, Gen-Ichiro Uechi, Paola Laurino
    bioRxiv 677393; doi: https://doi.org/10.1101/677393

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