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binomialRF: Scalable Feature Selection and Screening for Random Forests to Identify Biomarkers and Their Interactions

Samir Rachid Zaim, Colleen Kenost, Yves A. Lussier, Helen H. Zhang
doi: https://doi.org/10.1101/681973
Samir Rachid Zaim
1The Center for Biomedical Informatics & Biostatistics of the University of Arizona Health Sciences, 1230 N. Cherry Ave, Tucson, AZ, 85721, USA
2The Department of Medicine, College of Medicine, Tucson, 1501 N. Campbell Ave, Tucson, AZ, 85721, USA
3The Graduate Interdisciplinary Program in Statistics, 617 N. Santa Rita Ave. The University of Arizona, Tucson, AZ 85721, USA
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Colleen Kenost
1The Center for Biomedical Informatics & Biostatistics of the University of Arizona Health Sciences, 1230 N. Cherry Ave, Tucson, AZ, 85721, USA
2The Department of Medicine, College of Medicine, Tucson, 1501 N. Campbell Ave, Tucson, AZ, 85721, USA
3The Graduate Interdisciplinary Program in Statistics, 617 N. Santa Rita Ave. The University of Arizona, Tucson, AZ 85721, USA
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Yves A. Lussier
1The Center for Biomedical Informatics & Biostatistics of the University of Arizona Health Sciences, 1230 N. Cherry Ave, Tucson, AZ, 85721, USA
2The Department of Medicine, College of Medicine, Tucson, 1501 N. Campbell Ave, Tucson, AZ, 85721, USA
3The Graduate Interdisciplinary Program in Statistics, 617 N. Santa Rita Ave. The University of Arizona, Tucson, AZ 85721, USA
4The Center for Applied Genetic and Genomic Medicine, 1295 N. Martin, Tucson, AZ 85721, USA
5The University of Arizona Cancer Center, 3838 N. Campbell Ave, Tucson, AZ 85721, USA
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  • For correspondence: yves@email.arizona.edu hzhang@math.arizona.edu
Helen H. Zhang
6The Department of Mathematics, College of Sciences, 617 N. Santa Rita Ave. The University of Arizona, Tucson, AZ 85721, USA
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  • For correspondence: yves@email.arizona.edu hzhang@math.arizona.edu
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Posted June 26, 2019.
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binomialRF: Scalable Feature Selection and Screening for Random Forests to Identify Biomarkers and Their Interactions
Samir Rachid Zaim, Colleen Kenost, Yves A. Lussier, Helen H. Zhang
bioRxiv 681973; doi: https://doi.org/10.1101/681973
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binomialRF: Scalable Feature Selection and Screening for Random Forests to Identify Biomarkers and Their Interactions
Samir Rachid Zaim, Colleen Kenost, Yves A. Lussier, Helen H. Zhang
bioRxiv 681973; doi: https://doi.org/10.1101/681973

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