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Bacterial communities of herbivores and pollinators that have co-evolved Cucurbita spp

View ORCID ProfileLori R. Shapiro, Madison Youngblom, Erin D. Scully, Jorge Rocha, Joseph Nathaniel Paulson, Vanja Klepac-Ceraj, Angélica Cibrián-Jaramillo, Margarita M. López-Uribe
doi: https://doi.org/10.1101/691378
Lori R. Shapiro
1Department of Applied Ecology, North Carolina State University, Raleigh, NC, 27695 USA
2Department of Organismic and Evolutionary Biology, Harvard University, Cambridge MA, USA 02138
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  • ORCID record for Lori R. Shapiro
  • For correspondence: lori.r.shapiro@gmail.com
Madison Youngblom
3Department of Medical Microbiology & Immunology, University of Wisconsin-Madison, Madison WI, 53706 USA
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Erin D. Scully
4Center for Grain and Animal Health Research, Stored Product Insect and Engineering Research Unit, USDA-Agricultural Research Service, Manhattan, KS, 66502 USA
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Jorge Rocha
5Conacyt-Centro de Investigación y Desarrollo en Agrobiotecnología Alimentaria, San Agustin Tlaxiaca, Mexico 42162
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Joseph Nathaniel Paulson
6Department of Biostatistics, Product Development, Genentech Inc., South San Francisco, California 94102
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Vanja Klepac-Ceraj
7Department of Biological Sciences, Wellesley College, Wellesley, MA 02481 USA 16803
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Angélica Cibrián-Jaramillo
8Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Irapuato, Mexico 36284
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Margarita M. López-Uribe
9Department of Entomology, Center for Pollinator Research, Pennsylvania State University, University Park, PA
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Abstract

Insects, like all animals, are exposed to diverse environmental microbes throughout their life cycle. Yet, we know little about variation in the microbial communities associated with the majority of wild, unmanaged insect species. Here, we use a 16S rRNA gene metabarcoding approach to characterize temporal and geographic variation in the gut bacterial communities of herbivores (Acalymma vittatum and A. trivittatum) and pollinators (Eucera (Peponapis) pruinosa) that have co-evolved with the plant genus Cucurbita (pumpkin, squash, zucchini and gourds). Overall, we find high variability in the composition of bacterial communities in squash bees and beetles collected from different geographic locations and different time points throughout a growing season. Still, many of the most common OTUs are shared in E. (P.) pruinosa, A. vittatum and A. trivittatum. This suggests these insects may be exposed to similar environmental microbial sources while foraging on the same genus of host plants, and that similar microbial taxa may aid in digestion of Cucurbita plant material. The striped cucumber beetle A. vittatum can also transmit Erwinia tracheiphila, the causal agent of bacterial wilt of cucurbits. We find that few field-collected A. vittatum individuals have detectable E. tracheiphila, and when this plant pathogen is detected, it comprises less than 1% of the gut bacterial community. Together, these results are consistent with previous studies showing that plant feeding insects have highly variable gut bacterial communities, and provides a first step towards understanding the spatiotemporal variation in the microbial communities associated with herbivores and pollinators that depend on Cucurbita host plants.

Footnotes

  • Data Deposition Statement: Raw sequencing data generated for this study are deposited at NCBI SRA accession SUB5883192, and processed OTUs are deposited at SUB5883184. All processing and analysis scripts are available at https://github.com/lshapiro31/insect.microbiome

  • https://github.com/lshapiro31/cucurbit.insect.microbiome

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted July 03, 2019.
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Bacterial communities of herbivores and pollinators that have co-evolved Cucurbita spp
Lori R. Shapiro, Madison Youngblom, Erin D. Scully, Jorge Rocha, Joseph Nathaniel Paulson, Vanja Klepac-Ceraj, Angélica Cibrián-Jaramillo, Margarita M. López-Uribe
bioRxiv 691378; doi: https://doi.org/10.1101/691378
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Bacterial communities of herbivores and pollinators that have co-evolved Cucurbita spp
Lori R. Shapiro, Madison Youngblom, Erin D. Scully, Jorge Rocha, Joseph Nathaniel Paulson, Vanja Klepac-Ceraj, Angélica Cibrián-Jaramillo, Margarita M. López-Uribe
bioRxiv 691378; doi: https://doi.org/10.1101/691378

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