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siland: an R package for estimating the spatial influence of landscape

Florence Carpentier, Olivier Martin
doi: https://doi.org/10.1101/692566
Florence Carpentier
1Université Paris-Saclay, INRAE, AgroParisTech, UMR BIOGER, 78850, Thiverval-Grignon, France
2Université Paris-Saclay, INRAE, UR MaIAGE, 78350, Jouy-en-Josas, France
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  • For correspondence: florence.carpentier@inrae.fr
Olivier Martin
3INRAE, BioSP, 84914, Avignon, France
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Abstract

Context The spatial distributions of species and populations are both influenced by local variables and by characteristics of surrounding landscapes. Understanding how landscape features spatially structure the frequency of a trait in a population, the abundance of a species or the species’ richness remains difficult specially because the spatial scale effects of the landscape variables are often unknown.

Objectives Here, we present “siland”, an R package for analyzing the effect of landscape features on georeferenced point observations (described in a Geographic Information System shapefile format).

Methods & Results “siland” simultaneously estimates the spatial scales and intensities of landscape variable effects. It does not require any information about the scale of effect. Two methods are available: one is based on focal sample site (Bsiland method, b for buffer) and one is distance weighted using Spatial Influence Function (Fsiland method, f for function). ‘siland’ allows for effects tests, effects maps and models comparison.

Conclusions Adaptable and user-friendly, the “siland” package is a very practical tool to perform landscape analysis.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • This version is based on version 2.0 of the siland package.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted April 14, 2020.
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siland: an R package for estimating the spatial influence of landscape
Florence Carpentier, Olivier Martin
bioRxiv 692566; doi: https://doi.org/10.1101/692566
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siland: an R package for estimating the spatial influence of landscape
Florence Carpentier, Olivier Martin
bioRxiv 692566; doi: https://doi.org/10.1101/692566

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