New Results
Transcriptome assembly from long-read RNA-seq alignments with StringTie2
Sam Kovaka, Aleksey V. Zimin, Geo M. Pertea, Roham Razaghi, Steven L. Salzberg, Mihaela Pertea
doi: https://doi.org/10.1101/694554
Sam Kovaka
1Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218
2Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21205
Aleksey V. Zimin
2Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21205
3Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218
Geo M. Pertea
2Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21205
3Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218
Roham Razaghi
2Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21205
Steven L. Salzberg
1Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218
2Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21205
3Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218
Mihaela Pertea
2Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD 21205
4McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, MD 21205
Article usage
Posted July 08, 2019.
Transcriptome assembly from long-read RNA-seq alignments with StringTie2
Sam Kovaka, Aleksey V. Zimin, Geo M. Pertea, Roham Razaghi, Steven L. Salzberg, Mihaela Pertea
bioRxiv 694554; doi: https://doi.org/10.1101/694554
Subject Area
Subject Areas
- Biochemistry (11703)
- Bioengineering (8722)
- Bioinformatics (29127)
- Biophysics (14932)
- Cancer Biology (12048)
- Cell Biology (17359)
- Clinical Trials (138)
- Developmental Biology (9406)
- Ecology (14143)
- Epidemiology (2067)
- Evolutionary Biology (18268)
- Genetics (12220)
- Genomics (16766)
- Immunology (11841)
- Microbiology (28005)
- Molecular Biology (11552)
- Neuroscience (60808)
- Paleontology (450)
- Pathology (1864)
- Pharmacology and Toxicology (3231)
- Physiology (4939)
- Plant Biology (10384)
- Synthetic Biology (2877)
- Systems Biology (7333)
- Zoology (1642)