Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Cytoplasmic protein granules organize kinase-mediated RAS signaling

Asmin Tulpule, Juan Guan, Dana S. Neel, Yone Phar Lin, Ann Heslin, Hannah R. Allegakoen, Shriya Perati, Alejandro D. Ramirez, Xiaoyu Shi, Bin Yang, Siyu Feng, Suraj Makhija, David Brown, View ORCID ProfileBo Huang, View ORCID ProfileTrever G. Bivona
doi: https://doi.org/10.1101/704312
Asmin Tulpule
1Division of Pediatric Hematology/Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Juan Guan
2Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA
3Department of Physics, University of Florida, Gainesville, FL 32611, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Dana S. Neel
4Division of Hematology and Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Yone Phar Lin
1Division of Pediatric Hematology/Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Ann Heslin
1Division of Pediatric Hematology/Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Hannah R. Allegakoen
1Division of Pediatric Hematology/Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Shriya Perati
1Division of Pediatric Hematology/Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Alejandro D. Ramirez
2Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Xiaoyu Shi
2Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Bin Yang
2Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Siyu Feng
5UC Berkeley – UCSF Graduate Program in Bioengineering, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Suraj Makhija
5UC Berkeley – UCSF Graduate Program in Bioengineering, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
David Brown
2Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Bo Huang
2Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA
6Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94143, USA
7Chan Zuckerberg Biohub, San Francisco, CA 94158, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Bo Huang
  • For correspondence: trever.bivona@ucsf.edu bo.huang@ucsf.edu
Trever G. Bivona
4Division of Hematology and Oncology, University of California, San Francisco, San Francisco, CA 94143, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Trever G. Bivona
  • For correspondence: trever.bivona@ucsf.edu bo.huang@ucsf.edu
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

The spatial organization of a cell includes lipid membrane-based compartments and an emerging class of subcellular structures collectively described as biomolecular condensates1. Lipid membranes act as a biologically active scaffold to concentrate signaling molecules in multiple signal transduction pathways that regulate normal physiology and pathologic conditions such as cancer2. Notably, receptor tyrosine kinase (RTK)-mediated RAS GTPase/MAP kinase (MAPK) pathway signaling is thought to occur exclusively from lipid membrane compartments in mammalian cells3,4. Here, we uncover a membraneless, protein granule-based subcellular structure that can organize RTK/RAS/MAPK signaling. Chimeric (fusion) oncoproteins involving certain RTKs including ALK and RET undergo de novo assembly into cytoplasmic protein granules that locally concentrate the RAS activating complex GRB2/SOS1 and activate RAS in a lipid membrane-independent manner to initiate MAPK signaling. We show that formation of higher-order membraneless protein granules is both necessary and sufficient for RAS/MAPK signaling output in cells. These large-scale protein assemblies are functionally distinct from lower-order oligomerization of cytoplasmic RTK fusion oncoproteins. Our findings reveal membraneless, higher-order cytoplasmic protein assembly as a subcellular platform to activate RAS GTPases and a distinct principle by which cells can organize kinase-mediated oncogenic signaling.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
Back to top
PreviousNext
Posted February 23, 2020.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Cytoplasmic protein granules organize kinase-mediated RAS signaling
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Cytoplasmic protein granules organize kinase-mediated RAS signaling
Asmin Tulpule, Juan Guan, Dana S. Neel, Yone Phar Lin, Ann Heslin, Hannah R. Allegakoen, Shriya Perati, Alejandro D. Ramirez, Xiaoyu Shi, Bin Yang, Siyu Feng, Suraj Makhija, David Brown, Bo Huang, Trever G. Bivona
bioRxiv 704312; doi: https://doi.org/10.1101/704312
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Cytoplasmic protein granules organize kinase-mediated RAS signaling
Asmin Tulpule, Juan Guan, Dana S. Neel, Yone Phar Lin, Ann Heslin, Hannah R. Allegakoen, Shriya Perati, Alejandro D. Ramirez, Xiaoyu Shi, Bin Yang, Siyu Feng, Suraj Makhija, David Brown, Bo Huang, Trever G. Bivona
bioRxiv 704312; doi: https://doi.org/10.1101/704312

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Cancer Biology
Subject Areas
All Articles
  • Animal Behavior and Cognition (4231)
  • Biochemistry (9124)
  • Bioengineering (6769)
  • Bioinformatics (23971)
  • Biophysics (12110)
  • Cancer Biology (9511)
  • Cell Biology (13772)
  • Clinical Trials (138)
  • Developmental Biology (7623)
  • Ecology (11678)
  • Epidemiology (2066)
  • Evolutionary Biology (15495)
  • Genetics (10633)
  • Genomics (14312)
  • Immunology (9474)
  • Microbiology (22825)
  • Molecular Biology (9087)
  • Neuroscience (48922)
  • Paleontology (355)
  • Pathology (1480)
  • Pharmacology and Toxicology (2566)
  • Physiology (3843)
  • Plant Biology (8322)
  • Scientific Communication and Education (1468)
  • Synthetic Biology (2295)
  • Systems Biology (6183)
  • Zoology (1299)