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Genetic tool development in marine protists: Emerging model organisms for experimental cell biology
Drahomíra Faktorová, R. Ellen R. Nisbet, José A. Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew E. Allen, Manuel Ares Jr., Cristina Aresté, Cecilia Balestreri, Adrian C. Barbrook, Patrick Beardslee, Sara Bender, David S. Booth, François-Yves Bouget, Chris Bowler, Susana A. Breglia, Anita Broellochs, Colin Brownlee, Gertraud Burger, Heriberto Cerutti, Rachele Cesaroni, Miguel A. Chiurillo, Thomas Clemente, Duncan B. Coles, Jackie L. Collier, Liz Cooney, Kathryn Coyne, Roberto Docampo, Christopher L. Dupont, Virginia Edgcomb, Elin Einarsson, Pía A. Elustondo, Fernan Federici, Veronica Freire-Beneitez, Nastasia J. Freyria, Kodai Fukuda, Paulo A. García, Peter R. Girguis, Fatma Gomaa, Sebastian Gornik, Jian Guo, Vladimír Hampl, Yutaka Hanawa, Esteban R. Haro-Contreras, Elisabeth Hehenberger, Andrea Highfield, Yoshihisa Hirakawa, Amanda Hopes, Christopher J. Howe, Ian Hu, Jorge Ibañez, Nicholas A.T. Irwin, Yuu Ishii, Natalia Ewa Janowicz, Adam C. Jones, Ambar Kachale, Konomi Fujimura-Kamada, Binnypreet Kaur, Jonathan Z. Kaye, Eleanna Kazana, Patrick J. Keeling, Nicole King, Lawrence A. Klobutcher, Noelia Lander, Imen Lassadi, Zhuhong Li, Senjie Lin, Jean-Claude Lozano, Fulei Luan, Shinichiro Maruyama, Tamara Matute, Cristina Miceli, Jun Minagawa, Mark Moosburner, Sebastián R. Najle, Deepak Nanjappa, Isabel C. Nimmo, Luke Noble, Anna M.G. Novák Vanclová, Mariusz Nowacki, Isaac Nuñez, Arnab Pain, Angela Piersanti, Sandra Pucciarelli, Jan Pyrih, Joshua S. Rest, Mariana Rius, Deborah Robertson, Aldane Ruaud, Iñaki Ruiz-Trillo, Monika A. Sigg, Pamela A. Silver, Claudio H. Slamovits, Estienne Swart, G. Jason Smith, Brittany Sprecher, Rowena Stern, Tobias von der Haar, Lev Tsypin, Aaron Turkewitz, Jernej Turnšek, Matus Valach, Valérie Vergé, Peter von Dassow, Anastasios Tsaousis, Ross F. Waller, Lu Wang, Xiaoxue Wen, Glen Wheeler, April Woods, Huan Zhang, Thomas Mock, Alexandra Z. Worden, Julius Lukeš
doi: https://doi.org/10.1101/718239
Drahomíra Faktorová
1Institute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice, Czech Republic
R. Ellen R. Nisbet
2Department of Biochemistry, University of Cambridge, Cambridge, UK
José A. Fernández Robledo
3Bigelow Laboratory for Ocean Sciences, East Boothbay, USA
Elena Casacuberta
4Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, Barcelona, Spain
Lisa Sudek
5Monterey Bay Aquarium Research Institute, Moss Landing, USA
Andrew E. Allen
6Integrative Oceanography Division, Scripps Institution of Oceanography, University of California, San Diego, USA
7Microbial and Environmental Genomics, J. Craig Venter Institute, La Jolla, USA
Manuel Ares Jr.
8Molecular, Cell and Developmental Biology, University of California, Santa Cruz, USA
Cristina Aresté
4Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, Barcelona, Spain
Cecilia Balestreri
9The Marine Biological Association, Plymouth, UK
Adrian C. Barbrook
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Patrick Beardslee
10School of Biological Sciences, University of Nebraska, Lincoln, USA
Sara Bender
11Gordon and Betty Moore Foundation, Palo Alto, USA
David S. Booth
12Department of Molecular and Cell Biology, University of California, Berkeley, USA
François-Yves Bouget
13Sorbonne Université, CNRS UMR7621, Observatoire Océanologique, Banyul sur Mer, France
Chris Bowler
14Institute de Biologie de l’ENS, Département de biologie, École Normale Supérieure, CNRS, INSERM, Paris, France
Susana A. Breglia
15Centre for Comparative Genomics and Evolutionary Bioinformatics, Dalhousie University, Halifax, Canada
Anita Broellochs
12Department of Molecular and Cell Biology, University of California, Berkeley, USA
Colin Brownlee
9The Marine Biological Association, Plymouth, UK
Gertraud Burger
16Department of Biochemistry and Robert-Cedergren Centre for Bioinformatics and Genomics, Université de Montréal, Montreal, Canada
Heriberto Cerutti
10School of Biological Sciences, University of Nebraska, Lincoln, USA
Rachele Cesaroni
17Institute of Cell Biology, University of Bern, Bern, Switzerland
Miguel A. Chiurillo
18Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, USA
Thomas Clemente
10School of Biological Sciences, University of Nebraska, Lincoln, USA
Duncan B. Coles
3Bigelow Laboratory for Ocean Sciences, East Boothbay, USA
Jackie L. Collier
19School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, USA
Liz Cooney
20Department of Botany, University of British Columbia, Vancouver, Canada
Kathryn Coyne
21University of Delaware College of Earth, Ocean and Environment, Lewes, USA
Roberto Docampo
18Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, USA
Christopher L. Dupont
7Microbial and Environmental Genomics, J. Craig Venter Institute, La Jolla, USA
Virginia Edgcomb
22Woods Hole Oceanographic Institution, Woods Hole, MA, USA
Elin Einarsson
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Pía A. Elustondo
15Centre for Comparative Genomics and Evolutionary Bioinformatics, Dalhousie University, Halifax, Canada
Fernan Federici
23Facultad Ciencias Biológicas, Pontificia Universidad Católica de Chile, Fondo de Desarrollo de Areas Prioritarias, Center for Genome Regulation and Millennium Institute for Integrative Biology, Santiago de Chile, Chile
Veronica Freire-Beneitez
24School of Biosciences, University of Kent, Canterbury, Kent, UK
25Laboratory of Molecular and Evolutionary Parasitology, University of Kent, UK
Nastasia J. Freyria
3Bigelow Laboratory for Ocean Sciences, East Boothbay, USA
Kodai Fukuda
26Graduate School of Life and Environmental Sciences, University of Tsukuba, Ibaraki, Japan
Paulo A. García
27Department of Mechanical Engineering, Massachusetts Institute of Technology, Boston, USA
Peter R. Girguis
28Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, USA
Fatma Gomaa
28Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, USA
Sebastian Gornik
29Centre for Organismal Studies, University of Heidelberg, Heidelberg, Germany
Jian Guo
5Monterey Bay Aquarium Research Institute, Moss Landing, USA
8Molecular, Cell and Developmental Biology, University of California, Santa Cruz, USA
Vladimír Hampl
30Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
Yutaka Hanawa
31Faculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, Japan
Esteban R. Haro-Contreras
15Centre for Comparative Genomics and Evolutionary Bioinformatics, Dalhousie University, Halifax, Canada
Elisabeth Hehenberger
20Department of Botany, University of British Columbia, Vancouver, Canada
Andrea Highfield
9The Marine Biological Association, Plymouth, UK
Yoshihisa Hirakawa
31Faculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, Japan
Amanda Hopes
32School of Environmental Sciences, University of East Anglia, Norwich, UK
Christopher J. Howe
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Ian Hu
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Jorge Ibañez
23Facultad Ciencias Biológicas, Pontificia Universidad Católica de Chile, Fondo de Desarrollo de Areas Prioritarias, Center for Genome Regulation and Millennium Institute for Integrative Biology, Santiago de Chile, Chile
Nicholas A.T. Irwin
20Department of Botany, University of British Columbia, Vancouver, Canada
Yuu Ishii
33Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan
Natalia Ewa Janowicz
30Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
Adam C. Jones
11Gordon and Betty Moore Foundation, Palo Alto, USA
Ambar Kachale
1Institute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice, Czech Republic
Konomi Fujimura-Kamada
34Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki, Aichi, Japan
Binnypreet Kaur
1Institute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice, Czech Republic
Jonathan Z. Kaye
11Gordon and Betty Moore Foundation, Palo Alto, USA
Eleanna Kazana
24School of Biosciences, University of Kent, Canterbury, Kent, UK
25Laboratory of Molecular and Evolutionary Parasitology, University of Kent, UK
Patrick J. Keeling
20Department of Botany, University of British Columbia, Vancouver, Canada
Nicole King
12Department of Molecular and Cell Biology, University of California, Berkeley, USA
Lawrence A. Klobutcher
35Department of Marine Sciences, University of Connecticut, Groton, USA
Noelia Lander
18Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, USA
Imen Lassadi
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Zhuhong Li
18Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, USA
Senjie Lin
35Department of Marine Sciences, University of Connecticut, Groton, USA
Jean-Claude Lozano
13Sorbonne Université, CNRS UMR7621, Observatoire Océanologique, Banyul sur Mer, France
Fulei Luan
10School of Biological Sciences, University of Nebraska, Lincoln, USA
Shinichiro Maruyama
33Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan
Tamara Matute
23Facultad Ciencias Biológicas, Pontificia Universidad Católica de Chile, Fondo de Desarrollo de Areas Prioritarias, Center for Genome Regulation and Millennium Institute for Integrative Biology, Santiago de Chile, Chile
Cristina Miceli
36School of Biosciences and Veterinary Medicine, University of Camerino, Camerino, Italy
Jun Minagawa
34Division of Environmental Photobiology, National Institute for Basic Biology, Okazaki, Aichi, Japan
37Department of Basic Biology, School of Life Science, Graduate University for Advanced Studies, Okazaki, Aichi, Japan
Mark Moosburner
6Integrative Oceanography Division, Scripps Institution of Oceanography, University of California, San Diego, USA
7Microbial and Environmental Genomics, J. Craig Venter Institute, La Jolla, USA
Sebastián R. Najle
4Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, Barcelona, Spain
38Instituto de Biología Molecular y Celular, Universidad Nacional de Rosario, Rosario, Argentina
Deepak Nanjappa
21University of Delaware College of Earth, Ocean and Environment, Lewes, USA
Isabel C. Nimmo
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Luke Noble
39Center for Genomics and Systems Biology, New York University, New York, USA
Anna M.G. Novák Vanclová
30Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
Mariusz Nowacki
17Institute of Cell Biology, University of Bern, Bern, Switzerland
Isaac Nuñez
23Facultad Ciencias Biológicas, Pontificia Universidad Católica de Chile, Fondo de Desarrollo de Areas Prioritarias, Center for Genome Regulation and Millennium Institute for Integrative Biology, Santiago de Chile, Chile
Arnab Pain
40Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Jeddah, Saudi Arabia
41Center for Zoonosis Control, Global Institution for Collaborative Research and Education, Hokkaido University, Sapporo, Japan
Angela Piersanti
36School of Biosciences and Veterinary Medicine, University of Camerino, Camerino, Italy
Sandra Pucciarelli
36School of Biosciences and Veterinary Medicine, University of Camerino, Camerino, Italy
Jan Pyrih
1Institute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice, Czech Republic
24School of Biosciences, University of Kent, Canterbury, Kent, UK
30Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
Joshua S. Rest
42Department of Ecology and Evolution, Stony Brook University, Stony Brook, USA
Mariana Rius
19School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, USA
Deborah Robertson
43Lasry Center for Biosciences, Clark University, Worcester, USA
Aldane Ruaud
23Facultad Ciencias Biológicas, Pontificia Universidad Católica de Chile, Fondo de Desarrollo de Areas Prioritarias, Center for Genome Regulation and Millennium Institute for Integrative Biology, Santiago de Chile, Chile
Iñaki Ruiz-Trillo
4Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, Barcelona, Spain
44Departament de Genètica Microbiologia i Estadiśtica, Universitat de Barcelona, Barcelona, Catalonia, Spain
45Catalan Institution for Research and Advanced Studies, Barcelona, Catalonia, Spain
Monika A. Sigg
12Department of Molecular and Cell Biology, University of California, Berkeley, USA
Pamela A. Silver
46Department of Systems Biology, Harvard Medical School, Boston, USA
47Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, USA
Claudio H. Slamovits
15Centre for Comparative Genomics and Evolutionary Bioinformatics, Dalhousie University, Halifax, Canada
Estienne Swart
17Institute of Cell Biology, University of Bern, Bern, Switzerland
G. Jason Smith
48Department of Environmental Biotechnology, Moss Landing Marine Laboratoriess, Moss Landing, USA
Brittany Sprecher
35Department of Marine Sciences, University of Connecticut, Groton, USA
Rowena Stern
9The Marine Biological Association, Plymouth, UK
Tobias von der Haar
24School of Biosciences, University of Kent, Canterbury, Kent, UK
Lev Tsypin
49Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, USA
50Department of Biology, California Institute of Technology, Pasadena, USA
Aaron Turkewitz
49Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, USA
Jernej Turnšek
6Integrative Oceanography Division, Scripps Institution of Oceanography, University of California, San Diego, USA
7Microbial and Environmental Genomics, J. Craig Venter Institute, La Jolla, USA
46Department of Systems Biology, Harvard Medical School, Boston, USA
45Catalan Institution for Research and Advanced Studies, Barcelona, Catalonia, Spain
Matus Valach
16Department of Biochemistry and Robert-Cedergren Centre for Bioinformatics and Genomics, Université de Montréal, Montreal, Canada
Valérie Vergé
13Sorbonne Université, CNRS UMR7621, Observatoire Océanologique, Banyul sur Mer, France
Peter von Dassow
23Facultad Ciencias Biológicas, Pontificia Universidad Católica de Chile, Fondo de Desarrollo de Areas Prioritarias, Center for Genome Regulation and Millennium Institute for Integrative Biology, Santiago de Chile, Chile
51Instituto Milenio de Oceanografia de Chile, Santiago de Chile, Chile
Anastasios Tsaousis
24School of Biosciences, University of Kent, Canterbury, Kent, UK
25Laboratory of Molecular and Evolutionary Parasitology, University of Kent, UK
Ross F. Waller
2Department of Biochemistry, University of Cambridge, Cambridge, UK
Lu Wang
52Institute of Oceanography, Minjiang University, Fuzou, China
Xiaoxue Wen
10School of Biological Sciences, University of Nebraska, Lincoln, USA
Glen Wheeler
9The Marine Biological Association, Plymouth, UK
April Woods
48Department of Environmental Biotechnology, Moss Landing Marine Laboratoriess, Moss Landing, USA
Huan Zhang
35Department of Marine Sciences, University of Connecticut, Groton, USA
Thomas Mock
32School of Environmental Sciences, University of East Anglia, Norwich, UK
Alexandra Z. Worden
5Monterey Bay Aquarium Research Institute, Moss Landing, USA
53Ocean EcoSystems Biology Unit, Marine Ecology Division, Helmholtz Centre for Ocean Research, Kiel, Germany
Julius Lukeš
1Institute of Parasitology, Biology Centre, Czech Academy of Sciences and Faculty of Sciences, University of South Bohemia, České Budějovice, Czech Republic
Posted August 01, 2019.
Genetic tool development in marine protists: Emerging model organisms for experimental cell biology
Drahomíra Faktorová, R. Ellen R. Nisbet, José A. Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew E. Allen, Manuel Ares Jr., Cristina Aresté, Cecilia Balestreri, Adrian C. Barbrook, Patrick Beardslee, Sara Bender, David S. Booth, François-Yves Bouget, Chris Bowler, Susana A. Breglia, Anita Broellochs, Colin Brownlee, Gertraud Burger, Heriberto Cerutti, Rachele Cesaroni, Miguel A. Chiurillo, Thomas Clemente, Duncan B. Coles, Jackie L. Collier, Liz Cooney, Kathryn Coyne, Roberto Docampo, Christopher L. Dupont, Virginia Edgcomb, Elin Einarsson, Pía A. Elustondo, Fernan Federici, Veronica Freire-Beneitez, Nastasia J. Freyria, Kodai Fukuda, Paulo A. García, Peter R. Girguis, Fatma Gomaa, Sebastian Gornik, Jian Guo, Vladimír Hampl, Yutaka Hanawa, Esteban R. Haro-Contreras, Elisabeth Hehenberger, Andrea Highfield, Yoshihisa Hirakawa, Amanda Hopes, Christopher J. Howe, Ian Hu, Jorge Ibañez, Nicholas A.T. Irwin, Yuu Ishii, Natalia Ewa Janowicz, Adam C. Jones, Ambar Kachale, Konomi Fujimura-Kamada, Binnypreet Kaur, Jonathan Z. Kaye, Eleanna Kazana, Patrick J. Keeling, Nicole King, Lawrence A. Klobutcher, Noelia Lander, Imen Lassadi, Zhuhong Li, Senjie Lin, Jean-Claude Lozano, Fulei Luan, Shinichiro Maruyama, Tamara Matute, Cristina Miceli, Jun Minagawa, Mark Moosburner, Sebastián R. Najle, Deepak Nanjappa, Isabel C. Nimmo, Luke Noble, Anna M.G. Novák Vanclová, Mariusz Nowacki, Isaac Nuñez, Arnab Pain, Angela Piersanti, Sandra Pucciarelli, Jan Pyrih, Joshua S. Rest, Mariana Rius, Deborah Robertson, Aldane Ruaud, Iñaki Ruiz-Trillo, Monika A. Sigg, Pamela A. Silver, Claudio H. Slamovits, Estienne Swart, G. Jason Smith, Brittany Sprecher, Rowena Stern, Tobias von der Haar, Lev Tsypin, Aaron Turkewitz, Jernej Turnšek, Matus Valach, Valérie Vergé, Peter von Dassow, Anastasios Tsaousis, Ross F. Waller, Lu Wang, Xiaoxue Wen, Glen Wheeler, April Woods, Huan Zhang, Thomas Mock, Alexandra Z. Worden, Julius Lukeš
bioRxiv 718239; doi: https://doi.org/10.1101/718239
Genetic tool development in marine protists: Emerging model organisms for experimental cell biology
Drahomíra Faktorová, R. Ellen R. Nisbet, José A. Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew E. Allen, Manuel Ares Jr., Cristina Aresté, Cecilia Balestreri, Adrian C. Barbrook, Patrick Beardslee, Sara Bender, David S. Booth, François-Yves Bouget, Chris Bowler, Susana A. Breglia, Anita Broellochs, Colin Brownlee, Gertraud Burger, Heriberto Cerutti, Rachele Cesaroni, Miguel A. Chiurillo, Thomas Clemente, Duncan B. Coles, Jackie L. Collier, Liz Cooney, Kathryn Coyne, Roberto Docampo, Christopher L. Dupont, Virginia Edgcomb, Elin Einarsson, Pía A. Elustondo, Fernan Federici, Veronica Freire-Beneitez, Nastasia J. Freyria, Kodai Fukuda, Paulo A. García, Peter R. Girguis, Fatma Gomaa, Sebastian Gornik, Jian Guo, Vladimír Hampl, Yutaka Hanawa, Esteban R. Haro-Contreras, Elisabeth Hehenberger, Andrea Highfield, Yoshihisa Hirakawa, Amanda Hopes, Christopher J. Howe, Ian Hu, Jorge Ibañez, Nicholas A.T. Irwin, Yuu Ishii, Natalia Ewa Janowicz, Adam C. Jones, Ambar Kachale, Konomi Fujimura-Kamada, Binnypreet Kaur, Jonathan Z. Kaye, Eleanna Kazana, Patrick J. Keeling, Nicole King, Lawrence A. Klobutcher, Noelia Lander, Imen Lassadi, Zhuhong Li, Senjie Lin, Jean-Claude Lozano, Fulei Luan, Shinichiro Maruyama, Tamara Matute, Cristina Miceli, Jun Minagawa, Mark Moosburner, Sebastián R. Najle, Deepak Nanjappa, Isabel C. Nimmo, Luke Noble, Anna M.G. Novák Vanclová, Mariusz Nowacki, Isaac Nuñez, Arnab Pain, Angela Piersanti, Sandra Pucciarelli, Jan Pyrih, Joshua S. Rest, Mariana Rius, Deborah Robertson, Aldane Ruaud, Iñaki Ruiz-Trillo, Monika A. Sigg, Pamela A. Silver, Claudio H. Slamovits, Estienne Swart, G. Jason Smith, Brittany Sprecher, Rowena Stern, Tobias von der Haar, Lev Tsypin, Aaron Turkewitz, Jernej Turnšek, Matus Valach, Valérie Vergé, Peter von Dassow, Anastasios Tsaousis, Ross F. Waller, Lu Wang, Xiaoxue Wen, Glen Wheeler, April Woods, Huan Zhang, Thomas Mock, Alexandra Z. Worden, Julius Lukeš
bioRxiv 718239; doi: https://doi.org/10.1101/718239
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