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Structure determination from lipidic cubic phase embedded microcrystals by MicroED

Lan Zhu, Guanhong Bu, Liang Jing, Dan Shi, Tamir Gonen, View ORCID ProfileWei Liu, View ORCID ProfileBrent L. Nannenga
doi: https://doi.org/10.1101/724575
Lan Zhu
1Biodesign Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, 727 East Tyler Street, Tempe, AZ 85287, USA
2School of Molecular Sciences, Arizona State University, 551 East University Drive, Tempe, AZ 85287, USA
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Guanhong Bu
1Biodesign Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, 727 East Tyler Street, Tempe, AZ 85287, USA
3Chemical Engineering, School for Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, United States
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Liang Jing
1Biodesign Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, 727 East Tyler Street, Tempe, AZ 85287, USA
2School of Molecular Sciences, Arizona State University, 551 East University Drive, Tempe, AZ 85287, USA
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Dan Shi
4Structural Biophysics Laboratory, National Frederick Laboratory for Cancer Research, National Cancer Institute, Frederick, MD, United States
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Tamir Gonen
5Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles CA 90095 USA
6Departments of Biological Chemistry and Physiology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles CA 90095 USA
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Wei Liu
1Biodesign Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, 727 East Tyler Street, Tempe, AZ 85287, USA
2School of Molecular Sciences, Arizona State University, 551 East University Drive, Tempe, AZ 85287, USA
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  • ORCID record for Wei Liu
  • For correspondence: w.liu@asu.edu Brent.Nannenga@asu.edu
Brent L. Nannenga
1Biodesign Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, 727 East Tyler Street, Tempe, AZ 85287, USA
3Chemical Engineering, School for Engineering of Matter, Transport and Energy, Arizona State University, Tempe, AZ, United States
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  • ORCID record for Brent L. Nannenga
  • For correspondence: w.liu@asu.edu Brent.Nannenga@asu.edu
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Abstract

The lipidic cubic phase (LCP) technique has proved to facilitate the growth of high-quality crystals that are otherwise difficult to grow by other methods. Because crystals grown in LCP can be limited in size, improved techniques for structure determination from these small crystals are important. Microcrystal electron diffraction (MicroED) is a technique that uses a cryo-TEM to collect electron diffraction data and determine high-resolution structures from very thin micro and nanocrystals. In this work, we have used modified LCP and MicroED protocols to analyze crystals embedded in LCP. Proteinase K in LCP was used as a model system, and several LCP sample preparation strategies were tested. Among these, treatment with 2-Methyl-2,4-pentanediol (MPD) and lipase were both able to reduce the viscosity of the LCP and produce quality cryo-EM grids with well-diffracting crystals. These results set the stage for the use of MicroED to analyze other microcrystalline samples grown in LCP.

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Posted August 04, 2019.
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Structure determination from lipidic cubic phase embedded microcrystals by MicroED
Lan Zhu, Guanhong Bu, Liang Jing, Dan Shi, Tamir Gonen, Wei Liu, Brent L. Nannenga
bioRxiv 724575; doi: https://doi.org/10.1101/724575
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Structure determination from lipidic cubic phase embedded microcrystals by MicroED
Lan Zhu, Guanhong Bu, Liang Jing, Dan Shi, Tamir Gonen, Wei Liu, Brent L. Nannenga
bioRxiv 724575; doi: https://doi.org/10.1101/724575

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