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Controlling and measuring dynamic odorant stimuli in the laboratory

Srinivas Gorur-Shandilya, Carlotta Martelli, Mahmut Demir, Thierry Emonet
doi: https://doi.org/10.1101/733055
Srinivas Gorur-Shandilya
1Interdepartmental Neuroscience Program, Yale University
2Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven CT 06511
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Carlotta Martelli
2Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven CT 06511
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Mahmut Demir
2Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven CT 06511
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Thierry Emonet
1Interdepartmental Neuroscience Program, Yale University
2Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven CT 06511
3Department of Physics, Yale University, New Haven, CT 06511
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  • For correspondence: thierryemonet@yale.edu
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Abstract

Animals experience complex odorant stimuli that vary widely in composition, intensity and temporal properties. However, stimuli used to study olfaction in the laboratory are much simpler. This mismatch arises from the challenges in measuring and controlling them precisely and accurately. Even simple pulses can have diverse kinetics that depend on their molecular identity. Here, we introduce a model to describe how stimulus kinetics depend on the molecular identity of the odorant and the geometry of the delivery system. We describe methods to deliver dynamic odorant stimuli of several types, including broadly distributed stimuli that reproduce some of the statistics of naturalistic plumes, in a reproducible and precise manner. Finally, we introduce a method to calibrate a Photo-Ionization Detector to any odorant it can detect, using no additional components. Our approaches are affordable and flexible and can be used to advance our understanding of how olfactory neurons encode real-world odor signals.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted September 06, 2019.
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Controlling and measuring dynamic odorant stimuli in the laboratory
Srinivas Gorur-Shandilya, Carlotta Martelli, Mahmut Demir, Thierry Emonet
bioRxiv 733055; doi: https://doi.org/10.1101/733055
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Controlling and measuring dynamic odorant stimuli in the laboratory
Srinivas Gorur-Shandilya, Carlotta Martelli, Mahmut Demir, Thierry Emonet
bioRxiv 733055; doi: https://doi.org/10.1101/733055

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