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Multivalent proteins rapidly and reversibly phase-separate upon osmotic cell volume change

View ORCID ProfileAmeya P. Jalihal, View ORCID ProfileSethuramasundaram Pitchiaya, View ORCID ProfileLanbo Xiao, View ORCID ProfilePushpinder Bawa, Xia Jiang, Karan Bedi, View ORCID ProfileAbhijit Parolia, View ORCID ProfileMarcin Cieslik, View ORCID ProfileMats Ljungman, View ORCID ProfileArul M. Chinnaiyan, View ORCID ProfileNils G. Walter
doi: https://doi.org/10.1101/748293
Ameya P. Jalihal
1Single Molecule Analysis Group, Department of Chemistry, University of Michigan, Ann Arbor, MI 48109-1055, USA
2Cell and Molecular Biology Graduate Program, University of Michigan, Ann Arbor, Michigan 48109, USA
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  • ORCID record for Ameya P. Jalihal
Sethuramasundaram Pitchiaya
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
4Department of Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA
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Lanbo Xiao
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
4Department of Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA
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Pushpinder Bawa
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
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Xia Jiang
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
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Karan Bedi
5Department of Radiation Oncology, University of Michigan, Ann Arbor, Michigan 48109, USA
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Abhijit Parolia
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
4Department of Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA
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Marcin Cieslik
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
4Department of Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA
6Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan 48109, USA
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Mats Ljungman
5Department of Radiation Oncology, University of Michigan, Ann Arbor, Michigan 48109, USA
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Arul M. Chinnaiyan
3Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, MI 48109-1055, USA.
4Department of Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA
7Howard Hughes Medical Institute, University of Michigan, Ann Arbor, Michigan 48109, USA
8Department of Urology, University of Michigan, Ann Arbor, Michigan 48109, USA
9Rogel Cancer Center, University of Michigan, Ann Arbor, Michigan 48109, USA
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  • For correspondence: sethu@umich.edu arul@umich.edu nwalter@umich.edu
Nils G. Walter
1Single Molecule Analysis Group, Department of Chemistry, University of Michigan, Ann Arbor, MI 48109-1055, USA
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  • For correspondence: sethu@umich.edu arul@umich.edu nwalter@umich.edu
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SUMMARY

Processing bodies (PBs) and stress granules (SGs) are prominent examples of sub-cellular, membrane-less compartments that are observed under physiological and stress conditions, respectively. We observe that the trimeric PB protein DCP1A rapidly (within ∼10 s) phase-separates in mammalian cells during hyperosmotic stress and dissolves upon isosmotic rescue (over ∼100 s) with minimal impact on cell viability even after multiple cycles of osmotic perturbation. Strikingly, this rapid intracellular hyperosmotic phase separation (HOPS) correlates with the degree of cell volume compression, distinct from SG assembly, and is exhibited broadly by homo-multimeric (valency ≥ 2) proteins across several cell types. Notably, HOPS sequesters pre-mRNA cleavage factor components from actively transcribing genomic loci, providing a mechanism for hyperosmolarity-induced global impairment of transcription termination. Together, our data suggest that the multimeric proteome rapidly responds to changes in hydration and molecular crowding, revealing an unexpected mode of globally programmed phase separation and sequestration that adapts the cell to volume change.

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GRAPHICAL ABSTRACT

IN BRIEF Cells constantly experience osmotic variation. These external changes lead to changes in cell volume, and consequently the internal state of molecular crowding. Here, Jalihal and Pitchiaya et al. show that multimeric proteins respond rapidly to such cellular changes by undergoing rapid and reversible phase separation.

HIGHLIGHTS

  • DCP1A undergoes rapid and reversible hyperosmotic phase separation (HOPS)

  • HOPS of DCP1A depends on its trimerization domain

  • Self-interacting multivalent proteins (valency ≥ 2) undergo HOPS

  • HOPS of CPSF6 explains transcription termination defects during osmotic stress

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵10 Lead contact

  • Figures, text and author list updated. New supplementary tables created.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted May 23, 2020.
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Multivalent proteins rapidly and reversibly phase-separate upon osmotic cell volume change
Ameya P. Jalihal, Sethuramasundaram Pitchiaya, Lanbo Xiao, Pushpinder Bawa, Xia Jiang, Karan Bedi, Abhijit Parolia, Marcin Cieslik, Mats Ljungman, Arul M. Chinnaiyan, Nils G. Walter
bioRxiv 748293; doi: https://doi.org/10.1101/748293
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Multivalent proteins rapidly and reversibly phase-separate upon osmotic cell volume change
Ameya P. Jalihal, Sethuramasundaram Pitchiaya, Lanbo Xiao, Pushpinder Bawa, Xia Jiang, Karan Bedi, Abhijit Parolia, Marcin Cieslik, Mats Ljungman, Arul M. Chinnaiyan, Nils G. Walter
bioRxiv 748293; doi: https://doi.org/10.1101/748293

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