New Results
GPU Accelerated Adaptive Banded Event Alignment for Rapid Comparative Nanopore Signal Analysis
View ORCID ProfileHasindu Gamaarachchi, Chun Wai Lam, Gihan Jayatilaka, Hiruna Samarakoon, Jared T. Simpson, View ORCID ProfileMartin A. Smith, Sri Parameswaran
doi: https://doi.org/10.1101/756122
Hasindu Gamaarachchi
1School of Computer Science and Engineering, University of New South Wales, Sydney, Australia
2Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, Australia
Chun Wai Lam
1School of Computer Science and Engineering, University of New South Wales, Sydney, Australia
Gihan Jayatilaka
3Department of Computer Engineering, University of Peradeniya, Peradeniya, Sri Lanka
Hiruna Samarakoon
3Department of Computer Engineering, University of Peradeniya, Peradeniya, Sri Lanka
Jared T. Simpson
5Ontario Institute for Cancer Research, Toronto, Canada
6Department of Computer Science, University of Toronto, Toronto, Canada
Martin A. Smith
2Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research, Sydney, Australia
4St-Vincent’s Clinical School, Faculty of Medicine, University of New South Wales, Sydney, Australia
Sri Parameswaran
1School of Computer Science and Engineering, University of New South Wales, Sydney, Australia
Posted September 05, 2019.
GPU Accelerated Adaptive Banded Event Alignment for Rapid Comparative Nanopore Signal Analysis
Hasindu Gamaarachchi, Chun Wai Lam, Gihan Jayatilaka, Hiruna Samarakoon, Jared T. Simpson, Martin A. Smith, Sri Parameswaran
bioRxiv 756122; doi: https://doi.org/10.1101/756122
Subject Area
Subject Areas
- Biochemistry (11697)
- Bioengineering (8714)
- Bioinformatics (29118)
- Biophysics (14924)
- Cancer Biology (12047)
- Cell Biology (17347)
- Clinical Trials (138)
- Developmental Biology (9405)
- Ecology (14138)
- Epidemiology (2067)
- Evolutionary Biology (18260)
- Genetics (12214)
- Genomics (16759)
- Immunology (11838)
- Microbiology (27986)
- Molecular Biology (11545)
- Neuroscience (60780)
- Paleontology (450)
- Pathology (1864)
- Pharmacology and Toxicology (3228)
- Physiology (4937)
- Plant Biology (10381)
- Synthetic Biology (2876)
- Systems Biology (7332)
- Zoology (1642)