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Cell type specific novel lincRNAs and circRNAs in the BLUEPRINT haematopoietic transcriptomes atlas
Luigi Grassi, Osagie G. Izuogu, Natasha A.N. Jorge, Denis Seyres, Mariona Bustamante, Frances Burden, Samantha Farrow, Neda Farahi, Fergal J. Martin, Adam Frankish, Jonathan M. Mudge, Myrto Kostadima, Romina Petersen, John J. Lambourne, Sophia Rowlston, Enca Martin-Rendon, Laura Clarke, View ORCID ProfileKate Downes, Xavier Estivill, Paul Flicek, Joost H.A. Martens, Marie-Laure Yaspo, Hendrik G. Stunnenberg, Willem H. Ouwehand, Fabio Passetti, View ORCID ProfileErnest Turro, View ORCID ProfileMattia Frontini
doi: https://doi.org/10.1101/764613
Luigi Grassi
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
Osagie G. Izuogu
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Natasha A.N. Jorge
5Laboratory of Functional Genomics and Bioinformatics, Oswaldo Cruz Institute, Fundação Oswaldo Cruz, Rio de Janeiro 21040-360, Brazil
Denis Seyres
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
Mariona Bustamante
6ISGlobal, Institute for Global Health, Barcelona, Spain
7Center for Genomic Regulation (CRG), Barcelona, Spain
8Universitat Pompeu Fabra, Barcelona, Spain
Frances Burden
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
Samantha Farrow
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
Neda Farahi
9Division of Respiratory Medicine, Department of Medicine, University of Cambridge School of Clinical Medicine, Cambridge, United Kingdom
Fergal J. Martin
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Adam Frankish
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Jonathan M. Mudge
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Myrto Kostadima
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Romina Petersen
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
John J. Lambourne
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
Sophia Rowlston
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
Enca Martin-Rendon
10R&D Division, National Health Service (NHS)-Blood and Transplant, Oxford Centre, Oxford, United Kingdom
11Nuffield Division of Clinical Laboratory Sciences, Radcliffe Department of Medicine, University of Oxford, United Kingdom
Laura Clarke
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Kate Downes
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
Xavier Estivill
12Genes and Disease Research Group, Genetics and Genomics Program, Sidra Research Department, Sidra Medicine, Doha, Qatar
Paul Flicek
4European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Joost H.A. Martens
13Radboud University, Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Nijmegen, the Netherlands
Marie-Laure Yaspo
14Max Planck Institute for Molecular Genetics, Berlin, Germany
Hendrik G. Stunnenberg
13Radboud University, Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Nijmegen, the Netherlands
Willem H. Ouwehand
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
15Department of Human Genetics, the Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1HH, UK
16British Heart Foundation Centre of Excellence, Cambridge Biomedical Campus, Long Road, Cambridge CB2 0QQ, UK
Fabio Passetti
5Laboratory of Functional Genomics and Bioinformatics, Oswaldo Cruz Institute, Fundação Oswaldo Cruz, Rio de Janeiro 21040-360, Brazil
17Laboratory of Gene Expression Regulation, Carlos Chagas Institute, Fundação Oswaldo Cruz, Curitiba 81350-010, Brazil
Ernest Turro
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
3National Institute for Health Research BioResource, Rare Diseases, Cambridge University Hospitals, Cambridge, United Kingdom
18Medical Research Council Biostatistics Unit, Cambridge Institute of Public Health, Cambridge Biomedical Campus, Cambridge, UK
Mattia Frontini
1Department of Haematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
2National Health Service Blood and Transplant, Cambridge Biomedical Campus, Cambridge CB2 0PT, UK
16British Heart Foundation Centre of Excellence, Cambridge Biomedical Campus, Long Road, Cambridge CB2 0QQ, UK
Posted September 10, 2019.
Cell type specific novel lincRNAs and circRNAs in the BLUEPRINT haematopoietic transcriptomes atlas
Luigi Grassi, Osagie G. Izuogu, Natasha A.N. Jorge, Denis Seyres, Mariona Bustamante, Frances Burden, Samantha Farrow, Neda Farahi, Fergal J. Martin, Adam Frankish, Jonathan M. Mudge, Myrto Kostadima, Romina Petersen, John J. Lambourne, Sophia Rowlston, Enca Martin-Rendon, Laura Clarke, Kate Downes, Xavier Estivill, Paul Flicek, Joost H.A. Martens, Marie-Laure Yaspo, Hendrik G. Stunnenberg, Willem H. Ouwehand, Fabio Passetti, Ernest Turro, Mattia Frontini
bioRxiv 764613; doi: https://doi.org/10.1101/764613
Cell type specific novel lincRNAs and circRNAs in the BLUEPRINT haematopoietic transcriptomes atlas
Luigi Grassi, Osagie G. Izuogu, Natasha A.N. Jorge, Denis Seyres, Mariona Bustamante, Frances Burden, Samantha Farrow, Neda Farahi, Fergal J. Martin, Adam Frankish, Jonathan M. Mudge, Myrto Kostadima, Romina Petersen, John J. Lambourne, Sophia Rowlston, Enca Martin-Rendon, Laura Clarke, Kate Downes, Xavier Estivill, Paul Flicek, Joost H.A. Martens, Marie-Laure Yaspo, Hendrik G. Stunnenberg, Willem H. Ouwehand, Fabio Passetti, Ernest Turro, Mattia Frontini
bioRxiv 764613; doi: https://doi.org/10.1101/764613
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