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A molecular barcode and online tool to identify and map imported infection with Plasmodium vivax

Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia Madeline Montenegro, Alberto Tobón-Castaño, Matthew J Grigg, Bridget Barber, Timothy William, Nicholas M Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Awab Ghulam Rahim, Nguyen Hoang Chau, Tran Tinh Hien, Mohammad Shafiul Alam, Wasif A Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U Ferreira, Alyssa Barry, Ivo Mueller, Eleanor Drury, Sonia Goncalves, Victoria Simpson, Olivo Miotto, Alistair Miles, Nicholas J White, Francois Nosten, Dominic P Kwiatkowski, Ric N Price, Sarah Auburn
doi: https://doi.org/10.1101/776781

Article Information

doi 
https://doi.org/10.1101/776781
History 
  • September 24, 2019.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.

Author Information

  1. Hidayat Trimarsanto1,2,
  2. Roberto Amato3,4,
  3. Richard D Pearson3,4,
  4. Edwin Sutanto1,
  5. Rintis Noviyanti1,
  6. Leily Trianty1,
  7. Jutta Marfurt5,
  8. Zuleima Pava5,
  9. Diego F Echeverry6,7,
  10. Tatiana M Lopera-Mesa8,
  11. Lidia Madeline Montenegro8,
  12. Alberto Tobón-Castaño8,
  13. Matthew J Grigg5,9,
  14. Bridget Barber5,9,
  15. Timothy William9,10,
  16. Nicholas M Anstey5,
  17. Sisay Getachew11,12,
  18. Beyene Petros11,
  19. Abraham Aseffa12,
  20. Ashenafi Assefa13,
  21. Awab Ghulam Rahim14,15,
  22. Nguyen Hoang Chau16,
  23. Tran Tinh Hien16,
  24. Mohammad Shafiul Alam17,
  25. Wasif A Khan17,
  26. Benedikt Ley5,
  27. Kamala Thriemer5,
  28. Sonam Wangchuck18,
  29. Yaghoob Hamedi19,
  30. Ishag Adam20,
  31. Yaobao Liu21,22,
  32. Qi Gao22,
  33. Kanlaya Sriprawat23,
  34. Marcelo U Ferreira24,
  35. Alyssa Barry25,26,27,28,
  36. Ivo Mueller28,29,
  37. Eleanor Drury4,
  38. Sonia Goncalves4,
  39. Victoria Simpson3,4,
  40. Olivo Miotto3,4,13,
  41. Alistair Miles3,4,
  42. Nicholas J White13,30,
  43. Francois Nosten13,23,30,
  44. Dominic P Kwiatkowski3,4,
  45. Ric N Price*,5,13,30 and
  46. Sarah Auburn*,5,13,30
  1. 1Eijkman Institute for Molecular Biology, Jakarta 10430, Indonesia
  2. 2Agency for Assessment and Application of Technology, Jl. MH Thamrin 8, Jakarta 10340, Indonesia
  3. 3Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Old Road Campus, Oxford, OX3 7LF, UK
  4. 4Wellcome Sanger Institute, Hinxton, Cambridge CB10 1SA, UK
  5. 5Global and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Northern Territory 0811, Australia
  6. 6Centro Internacional de Entrenamiento e Investigaciones Medicas, CIDEIM, Cali, Colombia
  7. 7Universidad Icesi, Cali, Colombia
  8. 8Grupo Malaria, Facultad de Medicina, Universidad de Antioquia, Medellin, Colombia
  9. 9Infectious Diseases Society Sabah-Menzies School of Health Research Clinical Research Unit, Kota Kinabalu, Sabah, Malaysia
  10. 10Clinical Research Centre, Queen Elizabeth Hospital, Sabah, Malaysia
  11. 11College of Natural Sciences, Addis Ababa University, P.O. Box 52, Addis Ababa, Ethiopia
  12. 12Armauer Hansen Research Institute, P.O. Box 1005, Jimma Road, Addis Ababa, Ethiopia
  13. 13Ethiopian Public Health Institute, Addis Ababa, Ethiopia
  14. 14Mahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok 10400, Thailand
  15. 15Nangarhar Medical Faculty, Nangarhar University, Ministry of Higher Education, Afghanistan
  16. 16Centre for Tropical Medicine, Oxford University Clinical Research Unit, 764 Vo Van Kiet, W.1, Dist.5, Ho Chi Minh City, Vietnam
  17. 17Infectious Diseases Division, International Centre for Diarrheal Diseases Research, Bangladesh Mohakhali, Dhaka, 1212, Bangladesh
  18. 18Royal Center for Disease Control, Department of Public Health, Ministry of Health, Thimphu, Bhutan
  19. 19Infectious and Tropical Diseases Research Center, Hormozgan University of Medical Sciences, Bandar Abbas, Hormozgan Province, Iran
  20. 20Faculty of Medicine, University of Khartoum, P.O. Box 102, Khartoum, Sudan
  21. 21Medical College of Soochow University, Suzhou, Jiangsu, People’s Republic of China
  22. 22Key Laboratory of National Health and Family Planning Commission on Parasitic Disease Control and Prevention, Jiangsu Provincial Key Laboratory on Parasite and Vector Control Technology, Jiangsu Institute of Parasitic Diseases, Wuxi, Jiangsu, People’s Republic of China
  23. 23Shoklo Malaria Research Unit, Mae Sot, Tak 63110, Thailand
  24. 24Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil
  25. 25School of Medicine, Deakin University, Geelong, VIC, Australia
  26. 26Burnet Institute, Melbourne, VIC, Australia
  27. 27Population Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia
  28. 28Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia
  29. 29Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France
  30. 30Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, OX3 7LJ, UK
  1. ↵*Corresponding author: Dr Sarah Auburn, Menzies School of Health Research, PO Box 41096, Casuarina, Darwin, NT 0811, Australia; Tel: (+61) 8 8946 8503, sarah.auburn{at}menzies.edu.au
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Posted September 24, 2019.
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A molecular barcode and online tool to identify and map imported infection with Plasmodium vivax
Hidayat Trimarsanto, Roberto Amato, Richard D Pearson, Edwin Sutanto, Rintis Noviyanti, Leily Trianty, Jutta Marfurt, Zuleima Pava, Diego F Echeverry, Tatiana M Lopera-Mesa, Lidia Madeline Montenegro, Alberto Tobón-Castaño, Matthew J Grigg, Bridget Barber, Timothy William, Nicholas M Anstey, Sisay Getachew, Beyene Petros, Abraham Aseffa, Ashenafi Assefa, Awab Ghulam Rahim, Nguyen Hoang Chau, Tran Tinh Hien, Mohammad Shafiul Alam, Wasif A Khan, Benedikt Ley, Kamala Thriemer, Sonam Wangchuck, Yaghoob Hamedi, Ishag Adam, Yaobao Liu, Qi Gao, Kanlaya Sriprawat, Marcelo U Ferreira, Alyssa Barry, Ivo Mueller, Eleanor Drury, Sonia Goncalves, Victoria Simpson, Olivo Miotto, Alistair Miles, Nicholas J White, Francois Nosten, Dominic P Kwiatkowski, Ric N Price, Sarah Auburn
bioRxiv 776781; doi: https://doi.org/10.1101/776781
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