Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

The OpenPicoAmp-100k : an open-source high performance amplifier for single channel recording in planar lipid bilayers

View ORCID ProfileV Shlyonsky, D Gall
doi: https://doi.org/10.1101/781260
V Shlyonsky
1Laboratoire de Physiologie et Pharmacologie, Faculté de Médecine, Université libre de Bruxelles, Brussels, Belgium
2Laboratoired’Enseignement de la Physique, Faculté de Médecine, Université libre de Bruxelles, Brussels, Belgium
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for V Shlyonsky
  • For correspondence: vshlyons@ulb.ac.be
D Gall
1Laboratoire de Physiologie et Pharmacologie, Faculté de Médecine, Université libre de Bruxelles, Brussels, Belgium
2Laboratoired’Enseignement de la Physique, Faculté de Médecine, Université libre de Bruxelles, Brussels, Belgium
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

We propose an upgraded version of our previously designed open-source lipid bilayer amplifier. This improved amplifier is now suitable both for the use in introductory courses in biophysics and neurosciences at the undergraduate level and for scientific research. Similar to its predecessor, the OpenPicoAmp-100k is designed using the common lithographic printed circuit board fabrication process and off-the-shelf electronic components. It consists of the high-speed headstage, followed by voltage-gain amplifier with built-in 6-order Bessel filter. The amplifier has a bandwidth of 100 kHz in the presence of 100 pF input membrane capacitance and is capable of measuring ion channel current with amplitudes from sub-pA and up to ±4 nA. At the full bandwidth and with a 1 GΩ transimpedance gain, the amplifier shows 12 pArms noise with an open input and 112 pArms noise in the presence of 100 pF input capacitance, while at the 5 kHz bandwidth (typical in single-channel experiments) noise amounts to 0.45 pArms and 2.11 pArms, respectively. Using an optocoupler circuit producing TTL-controlled current impulses and using 50% threshold analysis we show that at full bandwidth the amplifier has deadtimes of 3.5 µs and 5 µs at signal-to-noise ratios(SNR) of 9 and 1.7, respectively. Near 100% of true current impulses longer than 5 µs and 6.6 µs are detected at these two respective SNRs, while false event detection rate remains acceptably low. The wide bandwidth of the amplifier was confirmed in bilayer experiments with alamethicin, for which open ion channel current events shorter that 10 µs could be resolved.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
Back to top
PreviousNext
Posted September 24, 2019.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
The OpenPicoAmp-100k : an open-source high performance amplifier for single channel recording in planar lipid bilayers
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
The OpenPicoAmp-100k : an open-source high performance amplifier for single channel recording in planar lipid bilayers
V Shlyonsky, D Gall
bioRxiv 781260; doi: https://doi.org/10.1101/781260
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
The OpenPicoAmp-100k : an open-source high performance amplifier for single channel recording in planar lipid bilayers
V Shlyonsky, D Gall
bioRxiv 781260; doi: https://doi.org/10.1101/781260

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Biophysics
Subject Areas
All Articles
  • Animal Behavior and Cognition (4224)
  • Biochemistry (9101)
  • Bioengineering (6749)
  • Bioinformatics (23935)
  • Biophysics (12086)
  • Cancer Biology (9491)
  • Cell Biology (13738)
  • Clinical Trials (138)
  • Developmental Biology (7614)
  • Ecology (11656)
  • Epidemiology (2066)
  • Evolutionary Biology (15476)
  • Genetics (10615)
  • Genomics (14292)
  • Immunology (9456)
  • Microbiology (22773)
  • Molecular Biology (9069)
  • Neuroscience (48840)
  • Paleontology (354)
  • Pathology (1479)
  • Pharmacology and Toxicology (2562)
  • Physiology (3822)
  • Plant Biology (8307)
  • Scientific Communication and Education (1467)
  • Synthetic Biology (2289)
  • Systems Biology (6170)
  • Zoology (1297)