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Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM
Marcus Alvarez, Elior Rahmani, Brandon Jew, Kristina M. Garske, Zong Miao, Jihane N. Benhammou, Chun Jimmie Ye, Joseph R. Pisegna, Kirsi H. Pietiläinen, Eran Halperin, Päivi Pajukanta
doi: https://doi.org/10.1101/786285
Marcus Alvarez
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
Elior Rahmani
2Computer Science Department in the School of Engineering, UCLA, Los Angeles, CA, USA
Brandon Jew
3Bioinformatics Interdepartmental Program, UCLA, Los Angeles, CA, USA
Kristina M. Garske
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
Zong Miao
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
3Bioinformatics Interdepartmental Program, UCLA, Los Angeles, CA, USA
Jihane N. Benhammou
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
5Vache and Tamar Manoukian Division of Digestive Diseases, UCLA, Los Angeles, CA, USA
Chun Jimmie Ye
4Institute for Human Genetics, Department of Epidemiology and Biostatistics, Department of Bioengineering and Therapeutic Sciences, UCSF, San Francisco, USA
Joseph R. Pisegna
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
5Vache and Tamar Manoukian Division of Digestive Diseases, UCLA, Los Angeles, CA, USA
Kirsi H. Pietiläinen
6Obesity Research Unit, Research Programs Unit, Diabetes and Obesity, University of Helsinki, Biomedicum Helsinki, Helsinki, Finland
7Obesity Center, Endocrinology, Abdominal Center, Helsinki University Central Hospital and University of Helsinki, Helsinki, Finland
Eran Halperin
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
2Computer Science Department in the School of Engineering, UCLA, Los Angeles, CA, USA
3Bioinformatics Interdepartmental Program, UCLA, Los Angeles, CA, USA
Päivi Pajukanta
1Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
3Bioinformatics Interdepartmental Program, UCLA, Los Angeles, CA, USA
8Institute for Precision Health, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA
Article usage
Posted October 02, 2019.
Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM
Marcus Alvarez, Elior Rahmani, Brandon Jew, Kristina M. Garske, Zong Miao, Jihane N. Benhammou, Chun Jimmie Ye, Joseph R. Pisegna, Kirsi H. Pietiläinen, Eran Halperin, Päivi Pajukanta
bioRxiv 786285; doi: https://doi.org/10.1101/786285
Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM
Marcus Alvarez, Elior Rahmani, Brandon Jew, Kristina M. Garske, Zong Miao, Jihane N. Benhammou, Chun Jimmie Ye, Joseph R. Pisegna, Kirsi H. Pietiläinen, Eran Halperin, Päivi Pajukanta
bioRxiv 786285; doi: https://doi.org/10.1101/786285
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