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A Lamin Associated Chromatin Model for Chromosome Organization

Ajoy Maji, Jahir Ahmed, Shubhankar Roy, Buddhapriya Chakrabarti, Mithun K. Mitra
doi: https://doi.org/10.1101/788497
Ajoy Maji
1Department of Physics, IIT Bombay, Mumbai 400076, India
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Jahir Ahmed
2AKI’s Poona College Of Arts, Science and Commerce, Camp, Pune-411001, India
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Shubhankar Roy
3Saha Institute of Nuclear Physics, Kolkata 700064, India
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Buddhapriya Chakrabarti
4Department of Physics and Astronomy, University of Sheffield, Sheffield, S3 7RH, UK
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Mithun K. Mitra
1Department of Physics, IIT Bombay, Mumbai 400076, India
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  • For correspondence: mithun@phy.iitb.ac.in
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Abstract

We propose a simple model for chromatin organization based on the interaction of the chromatin fibres with Lamin proteins along the nuclear membrane. Lamin proteins are known to be a major factor that influences chromatin organization, and hence gene expression in the cells. Our polymer model explains the formation of lamin associated domains, and for heteropolymers with sequence control, can reproduce observed length distributions of LADs. In particular, lamin mediated interaction can enhance the formation of chromosome territories as well as the organization of chromatin into tightly packed heterochromatin and the loosely-packed gene-rich euchromatin regions.

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Posted October 01, 2019.
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A Lamin Associated Chromatin Model for Chromosome Organization
Ajoy Maji, Jahir Ahmed, Shubhankar Roy, Buddhapriya Chakrabarti, Mithun K. Mitra
bioRxiv 788497; doi: https://doi.org/10.1101/788497
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A Lamin Associated Chromatin Model for Chromosome Organization
Ajoy Maji, Jahir Ahmed, Shubhankar Roy, Buddhapriya Chakrabarti, Mithun K. Mitra
bioRxiv 788497; doi: https://doi.org/10.1101/788497

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