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Modeling behaviorally relevant neural dynamics enabled by preferential subspace identification (PSID)

Omid G. Sani, Bijan Pesaran, View ORCID ProfileMaryam M. Shanechi
doi: https://doi.org/10.1101/808154
Omid G. Sani
1Ming Hsieh Department of Electrical Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, California, USA
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Bijan Pesaran
2Center for Neural Science, New York University, New York City, New York, USA
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Maryam M. Shanechi
1Ming Hsieh Department of Electrical Engineering, Viterbi School of Engineering, University of Southern California, Los Angeles, California, USA
3Neuroscience Graduate Program, University of Southern California, Los Angeles, California, USA
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  • ORCID record for Maryam M. Shanechi
  • For correspondence: shanechi@usc.edu
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Abstract

Neural activity exhibits dynamics that in addition to a behavior of interest also relate to other brain functions or internal states. Understanding how neural dynamics explain behavior requires dissociating behaviorally relevant and irrelevant dynamics, which is not achieved with current neural dynamic models as they are learned without considering behavior. We develop a novel preferential subspace identification (PSID) algorithm that models neural activity while dissociating and prioritizing its behaviorally relevant dynamics. Applying PSID to large-scale neural activity in two monkeys performing naturalistic 3D reach-and-grasps uncovered new features for neural dynamics. First, PSID revealed the behaviorally relevant dynamics to be markedly lower-dimensional than otherwise implied. Second, PSID discovered distinct rotational dynamics that were more predictive of behavior. Finally, PSID more accurately learned the behaviorally relevant dynamics for each joint and recording channel. PSID provides a general new tool to reveal behaviorally relevant neural dynamics that can otherwise go unnoticed.

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Posted October 17, 2019.
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Modeling behaviorally relevant neural dynamics enabled by preferential subspace identification (PSID)
Omid G. Sani, Bijan Pesaran, Maryam M. Shanechi
bioRxiv 808154; doi: https://doi.org/10.1101/808154
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Modeling behaviorally relevant neural dynamics enabled by preferential subspace identification (PSID)
Omid G. Sani, Bijan Pesaran, Maryam M. Shanechi
bioRxiv 808154; doi: https://doi.org/10.1101/808154

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