Classification of clear cell renal cell carcinoma based on PKM alternative splicing

Xiangyu Li; Beste Turanli; Kajetan Juszczak; Woonghee Kim; Muhammad Arif; Yusuke Sato; Seishi Ogawa; Hasan Turkez; Jens Nielsen; Jan Boren; Mathias Uhlen; Cheng Zhang; Adil Mardinoglu

doi:10.1101/823336

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Classification of clear cell renal cell carcinoma based on PKM alternative splicing

Xiangyu Li, Beste Turanli, Kajetan Juszczak, Woonghee Kim, Muhammad Arif, Yusuke Sato, Seishi Ogawa, Hasan Turkez, Jens Nielsen, Jan Boren, Mathias Uhlen, Cheng Zhang, Adil Mardinoglu

doi: https://doi.org/10.1101/823336

Xiangyu Li

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

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Beste Turanli

2Department of Bioengineering, Istanbul Medeniyet University, Istanbul, Turkey

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Kajetan Juszczak

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

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Woonghee Kim

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

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Muhammad Arif

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

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Yusuke Sato

3Department of Pathology and Tumor Biology, Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, Japan

4Department of Urology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan

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Seishi Ogawa

3Department of Pathology and Tumor Biology, Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, Japan

5Department of Medicine, Centre for Hematology and Regenerative Medicine, Karolinska Institute, Stockholm, Sweden

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Hasan Turkez

6Department of Molecular Biology and Genetics, Erzurum Technical University, Erzurum 25240, Turkey

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Jens Nielsen

7Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden

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Jan Boren

8Department of Molecular and Clinical Medicine, University of Gothenburg and Sahlgrenska University Hospital Gothenburg, Sweden

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Mathias Uhlen

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

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Cheng Zhang

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

9School of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou, PR China

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For correspondence: adilm@scilifelab.se cheng.zhang@scilifelab.se

Adil Mardinoglu

1Science for Life Laboratory, KTH - Royal Institute of Technology, Stockholm, Sweden

10Centre for Host–Microbiome Interactions, Dental Institute, King’s College London, London, SE1 9RT, United Kingdom

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For correspondence: adilm@scilifelab.se cheng.zhang@scilifelab.se

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RNA catabolic process and nuclear transport pathways (FDR<0.05; Table S1).[supplements/823336_file06.xlsx]

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Posted November 12, 2019.

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Classification of clear cell renal cell carcinoma based on PKM alternative splicing

Xiangyu Li, Beste Turanli, Kajetan Juszczak, Woonghee Kim, Muhammad Arif, Yusuke Sato, Seishi Ogawa, Hasan Turkez, Jens Nielsen, Jan Boren, Mathias Uhlen, Cheng Zhang, Adil Mardinoglu

bioRxiv 823336; doi: https://doi.org/10.1101/823336

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Classification of clear cell renal cell carcinoma based on PKM alternative splicing

Xiangyu Li, Beste Turanli, Kajetan Juszczak, Woonghee Kim, Muhammad Arif, Yusuke Sato, Seishi Ogawa, Hasan Turkez, Jens Nielsen, Jan Boren, Mathias Uhlen, Cheng Zhang, Adil Mardinoglu

bioRxiv 823336; doi: https://doi.org/10.1101/823336

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