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Capturing the Continuous Complexity of Behavior in C. elegans

View ORCID ProfileTosif Ahamed, View ORCID ProfileAntonio C. Costa, View ORCID ProfileGreg J. Stephens
doi: https://doi.org/10.1101/827535
Tosif Ahamed
Biological Physics Theory Unit, OIST Graduate University, Okinawa 904-0495, Japan
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Antonio C. Costa
Department of Physics and Astronomy, Vrije Universiteit Amsterdam, 1081HV Amsterdam, The Netherlands
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Greg J. Stephens
Biological Physics Theory Unit, OIST Graduate University, Okinawa 904-0495, JapanDepartment of Physics and Astronomy, Vrije Universiteit Amsterdam, 1081HV Amsterdam, The Netherlands
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Abstract

Animal behavior is often quantified through subjective, incomplete variables that may mask essential dynamics. Here, we develop a behavioral state space in which the full instantaneous state is smoothly unfolded as a combination of short-time posture dynamics. Our technique is tailored to multivariate observations and extends previous reconstructions through the use of maximal prediction. Applied to high-resolution video recordings of the roundworm C. elegans, we discover a low-dimensional state space dominated by three sets of cyclic trajectories corresponding to the worm’s basic stereotyped motifs: forward, backward, and turning locomotion. In contrast to this broad stereotypy, we find variability in the presence of locally-unstable dynamics, and this unpredictability shows signatures of deterministic chaos: a collection of unstable periodic orbits together with a positive maximal Lyapunov exponent. The full Lyapunov spectrum is symmetric with positive, chaotic exponents driving variability balanced by negative, dissipative exponents driving stereotypy. The symmetry is indicative of damped, driven Hamiltonian dynamics underlying the worm’s movement control.

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  • https://bitbucket.org/tosifahamed/behavioral-state-space

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 01, 2019.
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Capturing the Continuous Complexity of Behavior in C. elegans
Tosif Ahamed, Antonio C. Costa, Greg J. Stephens
bioRxiv 827535; doi: https://doi.org/10.1101/827535
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Capturing the Continuous Complexity of Behavior in C. elegans
Tosif Ahamed, Antonio C. Costa, Greg J. Stephens
bioRxiv 827535; doi: https://doi.org/10.1101/827535

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