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Heritable genetic variants in key cancer genes link cancer risk with anthropometric traits

Matteo Di Giovannantonio, Benjamin H.L Harris, Ping Zhang, Isaac Kitchen-Smith, Lingyun Xiong, Natasha Sahgal, Giovanni Stracquadanio, Marsha Wallace, Sarah Blagden, Simon Lord, David A. Harris, Adrian L. Harris, View ORCID ProfileFrancesca M. Buffa, Gareth Bond
doi: https://doi.org/10.1101/827634
Matteo Di Giovannantonio
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Benjamin H.L Harris
2Computational Biology and Integrative Genomics, Department of Oncology, University of Oxford, Oxford, UK
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Ping Zhang
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Isaac Kitchen-Smith
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Lingyun Xiong
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Natasha Sahgal
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Giovanni Stracquadanio
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Marsha Wallace
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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Sarah Blagden
3Early Phase Clinical Trials Unit, Department of Oncology, Churchill Hospital, Headington, Oxford OX3 7LE, UK
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Simon Lord
3Early Phase Clinical Trials Unit, Department of Oncology, Churchill Hospital, Headington, Oxford OX3 7LE, UK
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David A. Harris
4St Anne’s College, 56 Woodstock Rd, Oxford OX2 6HS, UK
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Adrian L. Harris
5Molecular Oncology Laboratories, Department of Oncology, The Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UK
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Francesca M. Buffa
2Computational Biology and Integrative Genomics, Department of Oncology, University of Oxford, Oxford, UK
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  • ORCID record for Francesca M. Buffa
  • For correspondence: francesca.buffa@oncology.ox.ac.uk gareth.bond@ludwig.ox.ac.uk
Gareth Bond
1Ludwig Institute for Cancer Research, University of Oxford, Nuffield Department of Clinical Medicine, Old Road Campus Research Building, Oxford OX3 7DQ, UK
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  • For correspondence: francesca.buffa@oncology.ox.ac.uk gareth.bond@ludwig.ox.ac.uk
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Abstract

Inherited genetic variants in tumour suppressors and oncogenes can increase the cancer risk, but little is known about their influence on anthropometric traits. Through the integration of inherited and somatic cancer genetic data, we define functional single nucleotide polymorphisms (SNPs) associated with cancer risk and explore potential pleiotropic associations with anthropometic traits in a cohort of 500,000 individuals. We identify three regulatory SNPs for three important cancer genes that associate with both anthropometric traits and cancer risk. We describe a novel association of a SNP in TP53 (rs78378222) with height, lean body mass measures and basal metabolic rate, as well as validating its known associations with brain and non-melanomatous skin cancer susceptibility. Our results clearly demonstrate that heritable variants in key cancer genes can associate with both differential cancer risk and anthropometric traits in the general population, thereby lending support for a role of genetics in linking these human phenotypes.

Footnotes

  • ↵* joint first authors

  • Funding: Ludwig Institute for Cancer Research and Cancer Research UK

  • https://www.ukbiobank.ac.uk/

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted November 01, 2019.
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Heritable genetic variants in key cancer genes link cancer risk with anthropometric traits
Matteo Di Giovannantonio, Benjamin H.L Harris, Ping Zhang, Isaac Kitchen-Smith, Lingyun Xiong, Natasha Sahgal, Giovanni Stracquadanio, Marsha Wallace, Sarah Blagden, Simon Lord, David A. Harris, Adrian L. Harris, Francesca M. Buffa, Gareth Bond
bioRxiv 827634; doi: https://doi.org/10.1101/827634
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Heritable genetic variants in key cancer genes link cancer risk with anthropometric traits
Matteo Di Giovannantonio, Benjamin H.L Harris, Ping Zhang, Isaac Kitchen-Smith, Lingyun Xiong, Natasha Sahgal, Giovanni Stracquadanio, Marsha Wallace, Sarah Blagden, Simon Lord, David A. Harris, Adrian L. Harris, Francesca M. Buffa, Gareth Bond
bioRxiv 827634; doi: https://doi.org/10.1101/827634

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