Abstract
We present an efficient and expandable calcium imaging analysis platform that encapsulates the entire analysis process from raw data to interactive e-figures. It provides a graphical interface to the latest analysis methods for pre-processing, and signal extraction. We demonstrate how Mesmerize can be applied to a broad range of scientific questions by using datasets ranging from the mouse visual cortex, neurons, epidermis and TLCs of the protochordate C. intestinalis, and C. elegans.
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
Posted November 13, 2019.
Mesmerize: A highly versatile platform for calcium imaging analysis and creation of self-contained FAIR datasets
