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Comparative evaluation of Aspergillus niger strains for endogenous pectin depolymerization capacity and suitability for D-galacturonic acid production

Dominik Schäfer, View ORCID ProfileKevin Schmitz, Dirk Weuster-Botz, View ORCID ProfileJ. Philipp Benz
doi: https://doi.org/10.1101/858548
Dominik Schäfer
Technical University of Munich, Department of Mechanical Engineering, Institute of Biochemical Engineering, Boltzmannstr. 15, 85748 Garching, Germany
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Kevin Schmitz
Technical University of Munich, Holzforschung München, Wood Bioprocesses, TUM School of Life Sciences Weihenstephan, Hans-Carl-von-Carlowitz-Platz 2 85354 Freising, Germany
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Dirk Weuster-Botz
Technical University of Munich, Department of Mechanical Engineering, Institute of Biochemical Engineering, Boltzmannstr. 15, 85748 Garching, Germany
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J. Philipp Benz
Technical University of Munich, Holzforschung München, Wood Bioprocesses, TUM School of Life Sciences Weihenstephan, Hans-Carl-von-Carlowitz-Platz 2 85354 Freising, Germany
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  • For correspondence: benz@hfm.tum.de
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Abstract

Pectinaceous agricultural residues rich in d-galacturonic acid (d-GalA), such as sugar beet pulp, are considered as promising feedstocks for waste-to-value conversions. Aspergillus niger is known for its strong pectinolytic activity. However, while specialized strains for production of citric acid or proteins are openly available, this is not the case for the production of pectinases. We therefore systematically compared the pectinolytic capabilities of six A. niger strains (ATCC 1015, ATCC 11414, NRRL 3122, CBS 513.88, NRRL 3, N402) using controlled batch cultivations in stirred-tank bioreactors. A. niger ATCC 11414 showed the highest polygalacturonase activity, specific protein secretion and a suitable morphology. Furthermore, d-GalA release from sugar beet pulp was 75% higher compared to the standard lab strain A. niger N402. Our study therefore presents a robust initial strain selection to guide future process improvement of d-GalA production from agricultural residues and identifies the most suitable base strain for further genetic optimizations.

Footnotes

  • Misspelling in the corresponding author's contact section. Correction of a concentration value in the figure caption of figure 5 (10% changed to 9% as correctly indicated in the main text)

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 02, 2019.
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Comparative evaluation of Aspergillus niger strains for endogenous pectin depolymerization capacity and suitability for D-galacturonic acid production
Dominik Schäfer, Kevin Schmitz, Dirk Weuster-Botz, J. Philipp Benz
bioRxiv 858548; doi: https://doi.org/10.1101/858548
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Comparative evaluation of Aspergillus niger strains for endogenous pectin depolymerization capacity and suitability for D-galacturonic acid production
Dominik Schäfer, Kevin Schmitz, Dirk Weuster-Botz, J. Philipp Benz
bioRxiv 858548; doi: https://doi.org/10.1101/858548

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