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Developing synergistic drug combinations to restore antibiotic sensitivity in drug-resistant Mycobacterium tuberculosis

Charles Omollo, Vinayak Singh, Elizabeth Kigondu, Antonina Wasuna, Pooja Agarwal, Atica Moosa, Thomas R. Ioerger, Valerie Mizrahi, Kelly Chibale, View ORCID ProfileDigby F. Warner
doi: https://doi.org/10.1101/860288
Charles Omollo
Department of Chemistry, University of Cape Town, Rondebosch 7701, South AfricaSAMRC Drug Discovery and Development Research Unit, University of Cape Town, Rondebosch 7701, South AfricaSAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa
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  • For correspondence: charles.omollo@uct.ac.za digby.warner@uct.ac.za
Vinayak Singh
Department of Chemistry, University of Cape Town, Rondebosch 7701, South AfricaSAMRC Drug Discovery and Development Research Unit, University of Cape Town, Rondebosch 7701, South AfricaSAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South AfricaH3D Drug Discovery and Development Centre, University of Cape Town, Rondebosch 7701, South Africa
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Elizabeth Kigondu
Department of Chemistry, University of Cape Town, Rondebosch 7701, South AfricaSAMRC Drug Discovery and Development Research Unit, University of Cape Town, Rondebosch 7701, South AfricaSAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South Africa
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Antonina Wasuna
Department of Chemistry, University of Cape Town, Rondebosch 7701, South AfricaSAMRC Drug Discovery and Development Research Unit, University of Cape Town, Rondebosch 7701, South AfricaSAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South Africa
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Pooja Agarwal
SAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa
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Atica Moosa
SAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South Africa
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Thomas R. Ioerger
Texas A&M University, Department of Computer Science, College Station, TX, 77843, USA
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Valerie Mizrahi
SAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South AfricaWellcome Centre for Infectious Diseases Research in Africa, University of Cape Town, Rondebosch 7701, South Africa
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Kelly Chibale
Department of Chemistry, University of Cape Town, Rondebosch 7701, South AfricaSAMRC Drug Discovery and Development Research Unit, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South AfricaH3D Drug Discovery and Development Centre, University of Cape Town, Rondebosch 7701, South Africa
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Digby F. Warner
SAMRC/NHLS/UCT Molecular Mycobacteriology Research Unit, DST/NRF Centre of Excellence for Biomedical Tuberculosis Research, Department of Pathology, University of Cape Town, Rondebosch 7701, South AfricaInstitute of Infectious Disease & Molecular Medicine, University of Cape Town, Rondebosch 7701, South AfricaWellcome Centre for Infectious Diseases Research in Africa, University of Cape Town, Rondebosch 7701, South Africa
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  • ORCID record for Digby F. Warner
  • For correspondence: charles.omollo@uct.ac.za digby.warner@uct.ac.za
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Abstract

BACKGROUND Mycobacterium tuberculosis is the leading global cause of death owing to an infectious agent, accounting for approximately one in four antimicrobial resistance (AMR) fatalities annually.

OBJECTIVE We aimed to identify synergistic two-drug combinations with the capacity to restore therapeutic efficacy against drug-resistant mutants of M. tuberculosis.

METHODS Combinations were investigated containing the known translational inhibitors, spectinomycin (SPT) and fusidic acid (FA), or the phenothiazine antibiotic, chlorpromazine (CPZ), which disrupts mycobacterial energy metabolism.

RESULTS Potentiation was observed between SPT and CPZ. This effect was lost against an M. tuberculosis mutant lacking the major facilitator superfamily (MFS) efflux pump, Rv1258c. Notably, the SPT-CPZ combination restored SPT efficacy against an SPT-resistant mutant carrying a g1379t point mutation in rrs, encoding the mycobacterial 16S ribosomal RNA. Combinations of SPT with FA, which targets the mycobacterial elongation factor G (EF-G), exhibited potentiating activity against wild-type M. tuberculosis. Moreover, this combination produced a small potentiating effect against defined FA-monoresistant and SPT-monoresistant mutants. Finally, combining SPT with the frontline anti-tuberculosis (TB) drugs, rifampicin and isoniazid, resulted in enhanced activity in vitro and ex vivo against both drug-susceptible M. tuberculosis and a RIF-monoresistant rpoB S531L mutant.

CONCLUSIONS These results provide evidence of the utility of novel potentiating drug combinations in restoring susceptibility against M. tuberculosis strains carrying genetic resistance to any one of the partner drugs.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 02, 2019.
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Developing synergistic drug combinations to restore antibiotic sensitivity in drug-resistant Mycobacterium tuberculosis
Charles Omollo, Vinayak Singh, Elizabeth Kigondu, Antonina Wasuna, Pooja Agarwal, Atica Moosa, Thomas R. Ioerger, Valerie Mizrahi, Kelly Chibale, Digby F. Warner
bioRxiv 860288; doi: https://doi.org/10.1101/860288
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Developing synergistic drug combinations to restore antibiotic sensitivity in drug-resistant Mycobacterium tuberculosis
Charles Omollo, Vinayak Singh, Elizabeth Kigondu, Antonina Wasuna, Pooja Agarwal, Atica Moosa, Thomas R. Ioerger, Valerie Mizrahi, Kelly Chibale, Digby F. Warner
bioRxiv 860288; doi: https://doi.org/10.1101/860288

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