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Recovering individual haplotypes and a contiguous genome assembly from pooled long read sequencing of the diamondback moth (Lepidoptera: Plutellidae)

Samuel Whiteford, Arjen E. van’t Hof, Ritesh Krishna, Thea Marubbi, Stephanie Widdison, Ilik J. Saccheri, Marcus Guest, Neil I. Morrison, Alistair C. Darby
doi: https://doi.org/10.1101/867879
Samuel Whiteford
1Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK
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  • For correspondence: sam.a.whiteford@gmail.com
Arjen E. van’t Hof
1Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK
5IBM Research UK, STFC Daresbury Laboratory, Warrington, WA4 4AD, UK
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Ritesh Krishna
1Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK
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Thea Marubbi
2Oxitec Ltd., 71 Innovation Drive, Milton Park, Abingdon, OX14 4RQ, UK
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Stephanie Widdison
3General Bioinformatics, Jealott’s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, UK
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Ilik J. Saccheri
1Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK
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Marcus Guest
4Syngenta, Jealott’s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, UK
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Neil I. Morrison
2Oxitec Ltd., 71 Innovation Drive, Milton Park, Abingdon, OX14 4RQ, UK
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Alistair C. Darby
1Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK
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Article Information

doi 
https://doi.org/10.1101/867879
History 
  • December 6, 2019.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Samuel Whiteford1,*,
  2. Arjen E. van’t Hof1,5,
  3. Ritesh Krishna1,
  4. Thea Marubbi2,
  5. Stephanie Widdison3,
  6. Ilik J. Saccheri1,
  7. Marcus Guest4,
  8. Neil I. Morrison2 and
  9. Alistair C. Darby1
  1. 1Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB, UK
  2. 2Oxitec Ltd., 71 Innovation Drive, Milton Park, Abingdon, OX14 4RQ, UK
  3. 3General Bioinformatics, Jealott’s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, UK
  4. 4Syngenta, Jealott’s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, UK
  5. 5IBM Research UK, STFC Daresbury Laboratory, Warrington, WA4 4AD, UK
  1. ↵*Corresponding author; email: sam.a.whiteford{at}gmail.com
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Posted December 06, 2019.
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Recovering individual haplotypes and a contiguous genome assembly from pooled long read sequencing of the diamondback moth (Lepidoptera: Plutellidae)
Samuel Whiteford, Arjen E. van’t Hof, Ritesh Krishna, Thea Marubbi, Stephanie Widdison, Ilik J. Saccheri, Marcus Guest, Neil I. Morrison, Alistair C. Darby
bioRxiv 867879; doi: https://doi.org/10.1101/867879
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Recovering individual haplotypes and a contiguous genome assembly from pooled long read sequencing of the diamondback moth (Lepidoptera: Plutellidae)
Samuel Whiteford, Arjen E. van’t Hof, Ritesh Krishna, Thea Marubbi, Stephanie Widdison, Ilik J. Saccheri, Marcus Guest, Neil I. Morrison, Alistair C. Darby
bioRxiv 867879; doi: https://doi.org/10.1101/867879

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