chrom.pos sample ref alt genotype totaldepth.x refdepth altdepth GoH_or_LoH Ti.Tv WhattoWhat PopulationPoly VerifiedYesorNo totaldepth.y contig106766.175 AH88_1 G A G/A 44 8 36 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_10 G A G/A 33 7 26 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_11 G A G/A 25 3 22 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_12 G A G/A 41 10 31 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_13 G A G/A 41 7 34 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_14 G A A/A 27 0 27 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_15 G A G/A 39 8 31 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_16 G A G/A 27 8 19 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_17 G A G/A 25 5 20 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_2 G A G/A 46 8 38 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_3 G A G/A 42 11 31 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_4 G A G/A 46 9 37 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_5 G A G/A 31 7 24 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_6 G A G/A 23 4 19 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_7 G A G/A 37 7 30 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_8 G A G/A 42 7 35 LoH Transition GtoA TRUE 35.9411764705882 contig106766.175 AH88_9 G A G/A 42 9 33 LoH Transition GtoA TRUE 35.9411764705882 contig107312.97 AH88_1 T C T/C 13 8 5 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_10 T C T/C 13 7 6 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_11 T C T/C 9 7 2 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_12 T C T/C 16 5 11 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_13 T C T/C 16 8 8 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_14 T C T/C 18 7 11 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_15 T C C/C 11 0 11 LoH Transition TtoC TRUE no 12.1176470588235 contig107312.97 AH88_16 T C T/C 13 8 5 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_17 T C T/C 8 2 6 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_2 T C T/C 12 5 7 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_3 T C T/C 14 3 11 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_4 T C T/C 8 3 5 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_5 T C T/C 7 3 4 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_6 T C T/C 12 10 2 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_7 T C T/C 6 2 4 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_8 T C T/C 17 11 6 LoH Transition TtoC TRUE 12.1176470588235 contig107312.97 AH88_9 T C T/C 13 5 8 LoH Transition TtoC TRUE 12.1176470588235 contig107357.58 AH88_1 C T T/T 19 0 19 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_10 C T T/T 14 0 14 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_11 C T C/T 20 4 16 DeNovo Transition TtoC FALSE yes 21.3529411764706 contig107357.58 AH88_12 C T T/T 27 0 27 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_13 C T T/T 23 0 23 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_14 C T T/T 29 0 29 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_15 C T C/T 29 5 24 DeNovo Transition TtoC FALSE yes 21.3529411764706 contig107357.58 AH88_16 C T T/T 20 0 20 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_17 C T T/T 11 0 11 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_2 C T T/T 25 0 25 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_3 C T T/T 17 0 17 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_4 C T T/T 27 0 27 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_5 C T T/T 19 0 19 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_6 C T T/T 17 0 17 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_7 C T T/T 22 0 22 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_8 C T T/T 20 0 20 DeNovo Transition TtoC FALSE 21.3529411764706 contig107357.58 AH88_9 C T T/T 24 0 24 DeNovo Transition TtoC FALSE 21.3529411764706 contig107727_178063.335 AH88_1 C G C/G 15 9 6 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_10 C G C/G 20 16 4 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_11 C G C/C 13 13 0 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_12 C G C/G 15 10 5 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_13 C G C/G 13 9 4 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_14 C G C/G 16 12 4 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_15 C G C/G 12 6 6 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_16 C G C/G 16 11 5 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_17 C G C/G 10 5 5 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_2 C G C/G 16 7 9 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_3 C G C/G 20 14 6 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_4 C G C/G 14 8 6 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_5 C G C/G 17 11 6 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_6 C G C/G 19 10 9 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_7 C G C/G 14 9 5 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_8 C G C/G 23 15 8 LoH Transversion GtoC TRUE 16 contig107727_178063.335 AH88_9 C G C/G 19 14 5 LoH Transversion GtoC TRUE 16 contig111006.133 AH88_1 C T C/T 16 14 2 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_10 C T C/C 22 22 0 LoH Transition TtoC TRUE yes 22.2352941176471 contig111006.133 AH88_11 C T C/T 24 20 4 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_12 C T C/T 28 22 6 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_13 C T C/T 16 14 2 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_14 C T C/C 31 31 0 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_15 C T C/T 25 19 6 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_16 C T C/T 13 8 5 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_17 C T C/T 9 7 2 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_2 C T C/T 24 20 4 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_3 C T C/T 33 26 7 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_4 C T C/T 18 14 4 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_5 C T C/T 26 21 5 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_6 C T C/T 16 14 2 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_7 C T C/T 28 22 6 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_8 C T C/T 28 23 5 LoH Transition TtoC TRUE 22.2352941176471 contig111006.133 AH88_9 C T C/C 21 21 0 LoH Transition TtoC TRUE 22.2352941176471 contig11809_79887_175727_11277.336 AH88_1 A G A/G 12 5 7 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_10 A G A/G 23 15 8 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_11 A G A/G 16 7 9 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_12 A G A/G 18 5 13 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_13 A G A/G 15 7 8 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_14 A G A/G 15 6 9 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_15 A G G/G 11 0 11 LoH Transition AtoG TRUE no 16.8823529411765 contig11809_79887_175727_11277.336 AH88_16 A G A/G 21 10 11 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_17 A G A/G 11 3 8 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_2 A G A/G 18 9 9 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_3 A G A/G 17 5 12 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_4 A G A/G 21 7 14 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_5 A G A/G 17 6 11 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_6 A G A/G 17 7 10 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_7 A G A/G 13 4 9 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_8 A G A/G 23 10 13 LoH Transition AtoG TRUE 16.8823529411765 contig11809_79887_175727_11277.336 AH88_9 A G A/G 19 7 12 LoH Transition AtoG TRUE 16.8823529411765 contig119096.52 AH88_1 G A G/A 21 8 13 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_10 G A G/A 12 4 8 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_11 G A G/A 20 7 13 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_12 G A G/A 27 9 18 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_13 G A G/A 12 2 10 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_14 G A G/A 16 3 13 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_15 G A G/A 11 4 7 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_16 G A A/A 12 0 12 LoH Transition GtoA TRUE no 15.8823529411765 contig119096.52 AH88_17 G A G/A 14 4 10 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_2 G A G/A 10 5 5 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_3 G A G/A 15 5 10 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_4 G A G/A 15 6 9 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_5 G A G/A 16 5 11 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_6 G A G/A 20 6 14 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_7 G A G/A 14 3 11 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_8 G A G/A 16 2 14 LoH Transition GtoA TRUE 15.8823529411765 contig119096.52 AH88_9 G A G/A 19 9 10 LoH Transition GtoA TRUE 15.8823529411765 contig137647.128 AH88_1 T C T/T 37 37 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_10 T C T/T 27 27 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_11 T C T/T 31 31 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_12 T C T/T 38 36 2 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_13 T C T/T 40 38 2 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_14 T C T/T 26 26 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_15 T C T/T 32 32 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_16 T C T/C 25 22 3 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_17 T C T/T 38 38 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_2 T C T/T 43 43 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_3 T C T/T 55 53 2 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_4 T C T/T 53 53 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_5 T C T/T 45 45 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_6 T C T/T 26 26 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_7 T C T/T 45 45 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_8 T C T/T 52 52 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig137647.128 AH88_9 T C T/T 45 45 0 DeNovo Transition TtoC FALSE 38.7058823529412 contig145497.1018 AH88_1 C A C/A 11 3 8 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_10 C A C/A 16 7 9 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_11 C A C/A 20 7 13 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_12 C A C/A 13 5 8 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_13 C A C/A 23 8 15 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_14 C A C/A 13 7 6 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_15 C A C/A 17 7 10 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_16 C A C/A 13 2 11 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_17 C A C/A 8 3 5 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_2 C A C/A 14 3 11 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_3 C A C/A 20 9 11 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_4 C A C/A 14 9 5 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_5 C A C/A 10 5 5 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_6 C A C/A 7 3 4 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_7 C A A/A 11 0 11 LoH Transversion CtoA FALSE no 14.2941176470588 contig145497.1018 AH88_8 C A C/A 18 7 11 LoH Transversion CtoA FALSE 14.2941176470588 contig145497.1018 AH88_9 C A C/A 15 7 8 LoH Transversion CtoA FALSE 14.2941176470588 contig147984.425 AH88_1 G C G/C 45 25 20 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_10 G C G/C 49 39 10 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_11 G C G/G 22 22 0 LoH Transversion CtoG TRUE no 39.7058823529412 contig147984.425 AH88_12 G C G/C 49 30 19 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_13 G C G/C 26 16 10 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_14 G C G/C 31 20 11 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_15 G C G/C 26 18 8 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_16 G C G/C 35 23 12 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_17 G C G/C 37 25 12 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_2 G C G/C 41 29 12 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_3 G C G/C 45 37 8 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_4 G C G/C 27 18 9 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_5 G C G/C 23 20 3 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_6 G C G/C 52 37 15 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_7 G C G/C 68 51 17 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_8 G C G/C 55 37 18 LoH Transversion CtoG TRUE 39.7058823529412 contig147984.425 AH88_9 G C G/C 44 34 10 LoH Transversion CtoG TRUE 39.7058823529412 contig148854.184 AH88_1 C A C/A 15 7 8 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_10 C A C/A 8 5 3 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_11 C A C/A 15 8 4 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_12 C A C/A 10 8 2 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_13 C A C/A 13 6 6 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_14 C A C/A 6 3 3 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_15 C A C/C 14 12 0 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_16 C A C/A 13 6 7 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_17 C A C/A 15 9 6 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_2 C A C/A 15 13 2 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_3 C A C/A 27 14 13 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_4 C A C/A 17 8 7 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_5 C A C/A 14 6 8 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_6 C A C/A 20 11 6 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_7 C A C/A 16 9 5 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_8 C A C/A 10 5 5 LoH Transversion AtoC TRUE 14.1764705882353 contig148854.184 AH88_9 C A C/A 13 7 6 LoH Transversion AtoC TRUE 14.1764705882353 contig151250.163 AH88_1 C G C/C 52 51 1 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_10 C G C/C 52 50 2 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_11 C G C/C 62 62 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_12 C G C/C 56 56 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_13 C G C/C 52 52 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_14 C G C/C 56 56 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_15 C G C/C 62 62 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_16 C G C/C 54 51 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_17 C G C/C 50 50 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_2 C G C/C 47 47 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_3 C G C/C 47 46 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_4 C G C/C 45 45 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_5 C G C/G 58 50 6 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_6 C G C/C 65 65 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_7 C G C/C 65 65 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_8 C G C/C 15 15 0 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151250.163 AH88_9 C G C/C 57 53 2 DeNovo Transversion CtoG FALSE 52.6470588235294 contig151582.98 AH88_1 C T C/T 17 11 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_10 C T T/T 11 0 11 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_11 C T C/T 10 4 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_12 C T C/T 12 6 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_13 C T C/T 7 4 3 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_14 C T C/T 7 2 5 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_15 C T C/T 11 5 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_16 C T C/T 10 4 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_17 C T C/T 9 3 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_2 C T C/T 10 4 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_3 C T C/T 13 2 11 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_4 C T C/T 9 5 4 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_5 C T C/T 10 4 6 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_6 C T C/T 10 2 8 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_7 C T C/T 13 4 9 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_8 C T C/T 13 3 10 LoH Transition CtoT FALSE 10.7647058823529 contig151582.98 AH88_9 C T C/T 11 6 5 LoH Transition CtoT FALSE 10.7647058823529 contig151647.64 AH88_1 G C G/G 32 32 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_10 G C G/G 28 28 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_11 G C G/G 33 33 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_12 G C G/G 34 34 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_13 G C G/G 36 36 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_14 G C G/C 21 18 3 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_15 G C G/G 27 27 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_16 G C G/G 30 30 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_17 G C G/G 29 29 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_2 G C G/G 31 31 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_3 G C G/G 39 39 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_4 G C G/G 35 35 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_5 G C G/G 28 28 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_6 G C G/G 31 31 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_7 G C G/G 35 35 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_8 G C G/G 35 35 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151647.64 AH88_9 G C G/G 33 33 0 DeNovo Transversion GtoC FALSE 31.5882352941176 contig151799.83 AH88_1 T A T/A 31 19 12 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_10 T A T/T 30 30 0 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_11 T A T/T 33 33 0 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_12 T A T/A 50 24 26 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_13 T A T/A 36 12 24 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_14 T A T/A 29 13 16 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_15 T A T/A 36 18 18 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_16 T A T/T 33 33 0 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_17 T A T/A 26 17 9 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_2 T A T/A 44 14 30 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_3 T A T/A 43 29 14 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_4 T A T/A 35 11 24 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_5 T A T/A 36 22 14 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_6 T A T/A 30 23 7 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_7 T A T/A 34 23 11 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_8 T A T/A 48 16 32 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.83 AH88_9 T A T/A 34 25 9 LoH Transversion AtoT TRUE 35.7647058823529 contig151799.89 AH88_1 A G A/G 33 21 12 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_10 A G A/G 28 4 24 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_11 A G A/G 33 7 26 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_12 A G A/G 47 39 8 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_13 A G A/G 36 31 5 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_14 A G A/G 32 27 5 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_15 A G A/G 40 31 9 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_16 A G A/G 30 6 24 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_17 A G A/G 25 20 5 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_2 A G A/A 45 44 1 LoH Transition GtoA FALSE yes 36.8823529411765 contig151799.89 AH88_3 A G A/G 46 30 16 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_4 A G A/A 40 39 1 LoH Transition GtoA FALSE yes 36.8823529411765 contig151799.89 AH88_5 A G A/G 37 20 17 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_6 A G A/G 29 16 13 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_7 A G A/G 38 18 20 LoH Transition GtoA FALSE 36.8823529411765 contig151799.89 AH88_8 A G A/A 51 51 0 LoH Transition GtoA FALSE yes 36.8823529411765 contig151799.89 AH88_9 A G A/G 37 15 22 LoH Transition GtoA FALSE 36.8823529411765 contig151860.349 AH88_1 G C G/C 17 6 10 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_10 G C G/C 29 9 18 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_11 G C G/C 25 8 17 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_12 G C G/C 24 7 17 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_13 G C G/C 28 9 17 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_14 G C G/C 17 8 9 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_15 G C G/C 23 5 18 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_16 G C C/C 17 0 17 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_17 G C G/C 11 5 6 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_2 G C G/C 23 11 12 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_3 G C G/C 19 10 7 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_4 G C G/C 28 15 12 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_5 G C G/C 12 3 7 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_6 G C G/C 20 5 15 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_7 G C G/C 16 6 10 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_8 G C G/C 21 4 16 LoH Transversion GtoC TRUE 20.3529411764706 contig151860.349 AH88_9 G C G/C 16 8 8 LoH Transversion GtoC TRUE 20.3529411764706 contig151965.452 AH88_1 A G A/G 14 10 4 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_10 A G A/G 21 15 6 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_11 A G A/G 33 28 5 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_12 A G A/G 28 23 5 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_13 A G A/G 24 19 5 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_14 A G A/G 16 14 2 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_15 A G A/G 19 14 5 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_16 A G A/G 29 24 5 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_17 A G A/G 18 15 3 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_2 A G A/G 22 16 6 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_3 A G A/G 29 21 8 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_4 A G A/A 27 27 0 LoH Transition GtoA TRUE no 25.1176470588235 contig151965.452 AH88_5 A G A/G 31 19 12 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_6 A G A/G 25 18 7 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_7 A G A/G 26 22 4 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_8 A G A/G 32 23 9 LoH Transition GtoA TRUE 25.1176470588235 contig151965.452 AH88_9 A G A/G 33 27 6 LoH Transition GtoA TRUE 25.1176470588235 contig153908.94 AH88_1 T G T/T 39 39 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_10 T G T/T 46 46 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_11 T G T/T 60 60 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_12 T G T/T 53 53 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_13 T G T/T 38 38 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_14 T G T/T 34 34 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_15 T G T/T 37 37 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_16 T G T/G 57 51 6 DeNovo Transversion TtoG TRUE yes 42.4705882352941 contig153908.94 AH88_17 T G T/T 40 40 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_2 T G T/T 34 34 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_3 T G T/T 48 48 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_4 T G T/T 39 39 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_5 T G T/T 39 39 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_6 T G T/T 47 47 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_7 T G T/T 40 40 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_8 T G T/T 33 33 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig153908.94 AH88_9 T G T/T 38 38 0 DeNovo Transversion TtoG TRUE 42.4705882352941 contig154133.828 AH88_1 A G G/G 11 0 11 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_10 A G G/G 28 0 28 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_11 A G G/G 27 0 27 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_12 A G G/G 24 0 24 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_13 A G G/G 25 1 24 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_14 A G A/G 17 5 12 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_15 A G G/G 21 0 21 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_16 A G G/G 26 1 25 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_17 A G G/G 17 0 17 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_2 A G G/G 17 0 17 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_3 A G A/G 35 9 26 DeNovo Transition GtoA FALSE yes 22.5882352941176 contig154133.828 AH88_4 A G G/G 17 0 17 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_5 A G G/G 24 0 24 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_6 A G G/G 25 0 25 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_7 A G G/G 18 0 18 DeNovo Transition GtoA FALSE 22.5882352941176 contig154133.828 AH88_8 A G A/G 23 6 17 DeNovo Transition GtoA FALSE yes 22.5882352941176 contig154133.828 AH88_9 A G G/G 29 0 29 DeNovo Transition GtoA FALSE 22.5882352941176 contig154171_209339.183 AH88_1 T C T/C 12 8 4 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_10 T C T/C 9 5 4 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_11 T C T/C 14 12 2 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_12 T C T/C 15 11 4 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_13 T C T/C 14 12 2 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_14 T C T/C 11 9 2 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_15 T C T/T 11 11 0 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_16 T C T/C 15 10 5 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_17 T C T/C 11 8 3 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_2 T C T/C 6 2 4 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_3 T C T/C 19 15 4 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_4 T C T/C 15 6 9 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_5 T C T/C 15 12 3 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_6 T C T/C 8 6 2 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_7 T C T/C 14 10 4 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_8 T C T/C 16 11 5 LoH Transition CtoT TRUE 12.8823529411765 contig154171_209339.183 AH88_9 T C T/C 14 11 3 LoH Transition CtoT TRUE 12.8823529411765 contig156970.84 AH88_1 C T C/T 14 5 9 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_10 C T C/T 15 7 8 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_11 C T C/T 13 9 4 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_12 C T C/T 13 8 5 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_13 C T C/T 9 5 4 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_14 C T C/T 17 5 12 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_15 C T C/T 15 8 7 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_16 C T C/T 16 10 6 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_17 C T C/T 10 8 2 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_2 C T C/T 11 8 3 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_3 C T C/T 12 6 6 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_4 C T C/T 16 7 9 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_5 C T C/T 12 8 4 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_6 C T C/T 9 6 3 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_7 C T C/T 12 8 4 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_8 C T C/T 16 10 6 LoH Transition TtoC FALSE 13.1176470588235 contig156970.84 AH88_9 C T C/C 13 13 0 LoH Transition TtoC FALSE no 13.1176470588235 contig169244.946 AH88_1 A C A/C 28 18 10 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_10 A C A/A 22 18 0 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_11 A C A/C 11 8 3 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_12 A C A/C 18 9 9 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_13 A C A/C 11 5 6 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_14 A C A/C 22 14 8 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_15 A C A/C 12 8 4 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_16 A C A/C 14 7 7 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_17 A C A/C 10 4 6 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_2 A C A/C 7 5 2 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_3 A C A/C 21 16 5 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_4 A C A/C 17 8 9 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_5 A C A/C 8 3 5 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_6 A C A/C 9 5 4 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_7 A C A/C 73 41 32 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_8 A C A/C 15 11 4 LoH Transversion CtoA TRUE 18.5294117647059 contig169244.946 AH88_9 A C A/C 17 11 6 LoH Transversion CtoA TRUE 18.5294117647059 contig170156.286 AH88_1 A G A/G 28 25 3 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_10 A G A/G 29 24 5 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_11 A G A/G 25 22 3 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_12 A G A/G 32 29 3 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_13 A G A/G 32 24 8 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_14 A G A/G 35 30 5 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_15 A G A/G 29 26 3 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_16 A G A/A 27 27 0 LoH Transition GtoA FALSE no 29.1176470588235 contig170156.286 AH88_17 A G A/G 26 23 3 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_2 A G A/G 31 27 4 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_3 A G A/G 31 25 6 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_4 A G A/G 27 24 3 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_5 A G A/G 27 23 4 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_6 A G A/G 27 23 4 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_7 A G A/G 27 23 4 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_8 A G A/G 30 24 6 LoH Transition GtoA FALSE 29.1176470588235 contig170156.286 AH88_9 A G A/G 32 29 3 LoH Transition GtoA FALSE 29.1176470588235 contig175744.396 AH88_1 A T T/T 15 0 15 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_10 A T T/T 25 0 25 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_11 A T T/T 23 0 23 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_12 A T T/T 17 0 17 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_13 A T T/T 26 0 26 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_14 A T T/T 15 0 15 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_15 A T T/T 24 0 24 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_16 A T T/T 21 0 21 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_17 A T T/T 11 0 11 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_2 A T T/T 18 0 18 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_3 A T T/T 26 0 26 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_4 A T T/T 20 0 20 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_5 A T T/T 23 0 23 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_6 A T T/T 23 0 23 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_7 A T T/T 18 0 18 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_8 A T A/T 16 2 14 DeNovo Transversion TtoA FALSE 20.0588235294118 contig175744.396 AH88_9 A T T/T 20 0 20 DeNovo Transversion TtoA FALSE 20.0588235294118 contig177128.184 AH88_1 T A T/T 53 53 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_10 T A T/T 52 52 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_11 T A T/T 57 57 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_12 T A T/T 62 62 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_13 T A T/T 63 63 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_14 T A T/T 44 44 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_15 T A T/T 50 50 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_16 T A T/T 58 58 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_17 T A T/T 47 45 2 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_2 T A T/T 51 49 2 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_3 T A T/A 52 45 7 DeNovo Transversion TtoA FALSE maybe 52.3529411764706 contig177128.184 AH88_4 T A T/T 44 44 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_5 T A T/T 54 54 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_6 T A T/T 41 39 2 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_7 T A T/T 50 50 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_8 T A T/T 50 50 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig177128.184 AH88_9 T A T/T 62 62 0 DeNovo Transversion TtoA FALSE 52.3529411764706 contig179303_125663.228 AH88_1 C G C/G 24 20 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_10 C G C/G 22 18 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_11 C G C/G 22 18 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_12 C G C/G 38 31 7 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_13 C G C/C 33 33 0 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_14 C G C/G 42 32 10 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_15 C G C/G 26 22 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_16 C G C/G 15 12 3 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_17 C G C/G 16 10 6 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_2 C G C/G 21 17 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_3 C G C/G 20 16 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_4 C G C/G 24 21 3 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_5 C G C/G 17 14 3 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_6 C G C/G 17 13 4 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_7 C G C/G 33 27 6 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_8 C G C/G 51 36 15 LoH Transversion GtoC FALSE 26.2352941176471 contig179303_125663.228 AH88_9 C G C/G 25 20 5 LoH Transversion GtoC FALSE 26.2352941176471 contig181086.130 AH88_1 A T A/A 40 40 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_10 A T A/A 29 29 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_11 A T A/A 32 32 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_12 A T A/A 55 55 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_13 A T A/A 49 49 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_14 A T A/T 63 48 15 DeNovo Transversion AtoT FALSE yes 43.8823529411765 contig181086.130 AH88_15 A T A/T 66 54 12 DeNovo Transversion AtoT FALSE yes 43.8823529411765 contig181086.130 AH88_16 A T A/A 40 40 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_17 A T A/A 42 42 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_2 A T A/A 45 45 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_3 A T A/A 43 43 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_4 A T A/A 43 43 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_5 A T A/A 41 41 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_6 A T A/A 31 31 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_7 A T A/A 43 43 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_8 A T A/A 43 43 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig181086.130 AH88_9 A T A/A 41 41 0 DeNovo Transversion AtoT FALSE 43.8823529411765 contig183052.181 AH88_1 G A G/A 24 21 3 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_10 G A G/A 22 17 5 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_11 G A G/A 23 20 3 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_12 G A G/A 31 27 4 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_13 G A G/G 34 33 1 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_14 G A G/A 52 42 10 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_15 G A G/G 40 40 0 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_16 G A G/A 18 13 5 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_17 G A G/A 15 12 3 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_2 G A G/G 27 27 0 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_3 G A G/A 31 28 3 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_4 G A G/A 22 19 3 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_5 G A G/A 22 19 3 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_6 G A G/A 20 16 4 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_7 G A G/A 27 23 4 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_8 G A G/A 30 26 4 LoH Transition AtoG FALSE 27.0588235294118 contig183052.181 AH88_9 G A G/A 22 15 7 LoH Transition AtoG FALSE 27.0588235294118 contig186539.170 AH88_1 A G A/G 15 9 6 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_10 A G A/G 17 13 4 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_11 A G A/G 24 16 8 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_12 A G A/G 22 14 8 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_13 A G A/G 17 10 7 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_14 A G A/G 16 12 4 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_15 A G A/G 21 16 5 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_16 A G A/G 15 9 6 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_17 A G A/G 9 5 4 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_2 A G A/G 20 8 12 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_3 A G A/G 14 8 6 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_4 A G A/G 14 9 5 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_5 A G A/A 16 16 0 LoH Transition GtoA FALSE no 17.3529411764706 contig186539.170 AH88_6 A G A/G 19 13 6 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_7 A G A/G 7 5 2 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_8 A G A/G 27 21 6 LoH Transition GtoA FALSE 17.3529411764706 contig186539.170 AH88_9 A G A/G 22 14 8 LoH Transition GtoA FALSE 17.3529411764706 contig186539.172 AH88_1 A G A/G 14 8 6 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_10 A G A/G 16 13 3 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_11 A G A/G 22 15 7 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_12 A G A/G 20 14 6 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_13 A G A/G 17 11 6 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_14 A G A/G 15 11 4 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_15 A G A/G 21 17 4 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_16 A G A/G 14 9 5 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_17 A G A/G 8 5 3 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_2 A G A/G 19 8 11 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_3 A G A/G 14 8 6 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_4 A G A/G 14 9 5 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_5 A G A/A 16 16 0 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_6 A G A/G 18 12 6 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_7 A G A/G 7 5 2 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_8 A G A/G 25 20 5 LoH Transition GtoA FALSE 16.4705882352941 contig186539.172 AH88_9 A G A/G 20 15 5 LoH Transition GtoA FALSE 16.4705882352941 contig188499.113 AH88_1 G A G/A 29 6 23 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_10 G A G/A 30 6 24 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_11 G A G/A 30 4 26 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_12 G A G/A 31 5 26 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_13 G A G/A 23 7 16 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_14 G A G/A 25 3 22 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_15 G A A/A 25 1 24 LoH Transition GtoA FALSE yes 26.8823529411765 contig188499.113 AH88_16 G A G/A 30 3 27 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_17 G A A/A 14 0 14 LoH Transition GtoA FALSE yes 26.8823529411765 contig188499.113 AH88_2 G A G/A 26 5 21 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_3 G A G/A 29 3 26 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_4 G A G/A 27 5 22 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_5 G A G/A 34 4 30 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_6 G A G/A 31 7 24 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_7 G A G/A 28 5 23 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_8 G A G/A 21 3 18 LoH Transition GtoA FALSE 26.8823529411765 contig188499.113 AH88_9 G A G/A 24 5 19 LoH Transition GtoA FALSE 26.8823529411765 contig189475.48 AH88_1 G A G/A 18 9 9 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_10 G A G/A 18 14 4 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_11 G A G/G 21 21 0 LoH Transition AtoG FALSE no 21.1176470588235 contig189475.48 AH88_12 G A G/A 25 19 6 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_13 G A G/A 20 13 7 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_14 G A G/A 22 13 9 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_15 G A G/A 27 14 13 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_16 G A G/A 20 10 10 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_17 G A G/A 13 8 5 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_2 G A G/A 27 19 8 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_3 G A G/A 24 14 10 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_4 G A G/A 19 10 9 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_5 G A G/A 25 14 11 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_6 G A G/A 14 8 6 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_7 G A G/A 19 14 5 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_8 G A G/A 21 12 9 LoH Transition AtoG FALSE 21.1176470588235 contig189475.48 AH88_9 G A G/A 26 19 7 LoH Transition AtoG FALSE 21.1176470588235 contig209153.152 AH88_1 G T G/T 24 11 13 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_10 G T G/T 31 16 15 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_11 G T G/T 32 14 18 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_12 G T G/T 26 11 15 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_13 G T G/T 23 8 15 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_14 G T G/T 26 9 17 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_15 G T G/T 27 11 16 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_16 G T T/T 14 0 14 LoH Transversion GtoT TRUE inconclusive 26.1764705882353 contig209153.152 AH88_17 G T G/T 23 11 12 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_2 G T G/T 28 6 22 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_3 G T G/T 29 13 16 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_4 G T G/T 27 10 17 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_5 G T G/T 28 16 12 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_6 G T G/T 20 7 13 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_7 G T G/T 27 11 16 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_8 G T G/T 29 17 12 LoH Transversion GtoT TRUE 26.1764705882353 contig209153.152 AH88_9 G T G/T 31 15 16 LoH Transversion GtoT TRUE 26.1764705882353 contig211009.36 AH88_1 G A G/G 14 14 0 LoH Transition AtoG TRUE no 14.4117647058824 contig211009.36 AH88_10 G A G/A 18 15 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_11 G A G/A 8 6 2 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_12 G A G/A 16 9 7 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_13 G A G/A 13 10 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_14 G A G/A 10 7 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_15 G A G/A 19 16 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_16 G A G/A 16 13 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_17 G A G/A 10 7 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_2 G A G/A 10 8 2 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_3 G A G/G 14 14 0 LoH Transition AtoG TRUE no 14.4117647058824 contig211009.36 AH88_4 G A G/A 16 12 4 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_5 G A G/A 12 9 3 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_6 G A G/A 15 11 4 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_7 G A G/A 21 17 4 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_8 G A G/A 16 12 4 LoH Transition AtoG TRUE 14.4117647058824 contig211009.36 AH88_9 G A G/A 17 13 4 LoH Transition AtoG TRUE 14.4117647058824 contig211169.301 AH88_1 C T C/T 46 7 39 LoH Transition CtoT TRUE 31 contig211169.301 AH88_10 C T C/T 28 4 24 LoH Transition CtoT TRUE 31 contig211169.301 AH88_11 C T T/T 13 0 13 LoH Transition CtoT TRUE no 31 contig211169.301 AH88_12 C T C/T 37 6 31 LoH Transition CtoT TRUE 31 contig211169.301 AH88_13 C T C/T 27 6 21 LoH Transition CtoT TRUE 31 contig211169.301 AH88_14 C T C/T 39 5 34 LoH Transition CtoT TRUE 31 contig211169.301 AH88_15 C T C/T 28 5 23 LoH Transition CtoT TRUE 31 contig211169.301 AH88_16 C T C/T 24 2 22 LoH Transition CtoT TRUE 31 contig211169.301 AH88_17 C T C/T 32 8 24 LoH Transition CtoT TRUE 31 contig211169.301 AH88_2 C T C/T 37 5 32 LoH Transition CtoT TRUE 31 contig211169.301 AH88_3 C T C/T 16 5 11 LoH Transition CtoT TRUE 31 contig211169.301 AH88_4 C T C/T 20 4 16 LoH Transition CtoT TRUE 31 contig211169.301 AH88_5 C T C/T 14 2 12 LoH Transition CtoT TRUE 31 contig211169.301 AH88_6 C T C/T 23 3 20 LoH Transition CtoT TRUE 31 contig211169.301 AH88_7 C T C/T 49 8 41 LoH Transition CtoT TRUE 31 contig211169.301 AH88_8 C T C/T 54 9 45 LoH Transition CtoT TRUE 31 contig211169.301 AH88_9 C T C/T 40 4 36 LoH Transition CtoT TRUE 31 contig212947.222 AH88_1 T A T/A 23 13 10 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_10 T A T/A 27 15 12 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_11 T A T/A 29 17 12 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_12 T A T/A 30 15 15 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_13 T A T/A 20 12 8 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_14 T A A/A 8 0 8 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_15 T A T/A 26 14 12 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_16 T A T/A 26 15 11 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_17 T A T/A 15 8 7 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_2 T A T/A 22 14 8 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_3 T A T/A 29 14 15 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_4 T A T/A 19 11 8 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_5 T A T/A 23 13 10 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_6 T A T/A 21 10 11 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_7 T A T/A 20 8 12 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_8 T A T/A 23 14 9 LoH Transversion TtoA FALSE 22.7647058823529 contig212947.222 AH88_9 T A T/A 26 15 11 LoH Transversion TtoA FALSE 22.7647058823529 contig213091.289 AH88_1 A T A/A 57 57 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_10 A T A/A 57 57 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_11 A T A/A 65 65 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_12 A T A/A 50 50 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_13 A T A/A 47 47 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_14 A T A/A 52 50 2 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_15 A T A/A 59 59 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_16 A T A/A 65 65 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_17 A T A/A 54 52 2 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_2 A T A/A 47 47 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_3 A T A/A 52 52 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_4 A T A/A 45 45 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_5 A T A/A 57 57 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_6 A T A/A 67 67 0 DeNovo Transversion AtoT TRUE 54.1764705882353 contig213091.289 AH88_7 A T A/T 47 42 5 DeNovo Transversion AtoT TRUE maybe 54.1764705882353 contig213091.289 AH88_8 A T A/T 50 45 5 DeNovo Transversion AtoT TRUE maybe 54.1764705882353 contig213091.289 AH88_9 A T A/A 50 48 2 DeNovo Transversion AtoT TRUE 54.1764705882353 contig3619.99 AH88_1 T C T/C 9 6 3 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_10 T C T/C 8 5 3 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_11 T C T/C 10 7 3 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_12 T C T/C 12 7 5 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_13 T C T/C 12 9 3 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_14 T C T/C 10 5 5 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_15 T C T/C 12 10 2 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_16 T C T/C 9 5 4 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_17 T C T/C 4 2 2 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_2 T C T/C 9 6 3 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_3 T C T/C 13 9 4 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_4 T C T/C 11 5 6 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_5 T C T/C 6 3 3 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_6 T C T/C 7 3 4 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_7 T C T/C 18 12 6 LoH Transition CtoT FALSE 10.1764705882353 contig3619.99 AH88_8 T C T/T 13 13 0 LoH Transition CtoT FALSE no 10.1764705882353 contig3619.99 AH88_9 T C T/C 10 6 4 LoH Transition CtoT FALSE 10.1764705882353 contig600029.304 AH88_1 C G C/C 27 27 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_10 C G C/C 30 30 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_11 C G C/C 24 24 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_12 C G C/C 30 30 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_13 C G C/C 20 20 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_14 C G C/G 10 5 5 DeNovo Transversion CtoG FALSE no 25.1764705882353 contig600029.304 AH88_15 C G C/C 21 21 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_16 C G C/C 28 28 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_17 C G C/C 25 25 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_2 C G C/C 19 19 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_3 C G C/C 27 27 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_4 C G C/C 27 27 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_5 C G C/C 31 31 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_6 C G C/C 31 31 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_7 C G C/C 25 25 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_8 C G C/C 27 27 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.304 AH88_9 C G C/C 26 26 0 DeNovo Transversion CtoG FALSE 25.1764705882353 contig600029.376 AH88_1 T C T/C 55 40 15 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_10 T C T/C 53 41 12 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_11 T C T/C 49 38 6 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_12 T C T/C 71 56 15 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_13 T C T/C 53 44 9 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_14 T C T/T 39 39 0 LoH Transition CtoT FALSE no 54.7058823529412 contig600029.376 AH88_15 T C T/C 51 45 6 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_16 T C T/T 63 55 3 LoH Transition CtoT FALSE no 54.7058823529412 contig600029.376 AH88_17 T C T/C 44 36 8 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_2 T C T/C 59 50 9 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_3 T C T/C 55 32 21 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_4 T C T/C 67 41 26 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_5 T C T/C 52 40 12 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_6 T C T/C 60 40 20 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_7 T C T/C 48 35 12 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_8 T C T/C 67 46 21 LoH Transition CtoT FALSE 54.7058823529412 contig600029.376 AH88_9 T C T/C 44 32 12 LoH Transition CtoT FALSE 54.7058823529412 contig600029.411 AH88_1 C T C/T 38 9 29 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_10 C T C/T 32 17 15 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_11 C T C/T 36 13 23 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_12 C T C/T 45 15 30 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_13 C T C/T 38 12 26 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_14 C T T/T 31 0 31 LoH Transition CtoT FALSE no 39.5882352941176 contig600029.411 AH88_15 C T C/T 35 4 31 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_16 C T C/T 39 12 27 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_17 C T C/T 37 8 29 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_2 C T C/T 38 11 27 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_3 C T C/T 46 24 22 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_4 C T C/T 51 26 25 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_5 C T C/T 43 22 21 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_6 C T C/T 45 22 23 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_7 C T C/T 42 17 25 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_8 C T C/T 45 17 28 LoH Transition CtoT FALSE 39.5882352941176 contig600029.411 AH88_9 C T C/T 32 16 16 LoH Transition CtoT FALSE 39.5882352941176 contig600029.417 AH88_1 T C T/C 32 24 8 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_10 T C T/C 28 23 5 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_11 T C T/C 29 23 6 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_12 T C T/C 45 33 12 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_13 T C T/C 35 26 9 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_14 T C T/T 31 31 0 LoH Transition CtoT FALSE yes 36.0588235294118 contig600029.417 AH88_15 T C T/C 33 29 4 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_16 T C T/C 32 28 4 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_17 T C T/C 32 25 7 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_2 T C T/C 30 26 4 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_3 T C T/C 41 20 21 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_4 T C T/C 51 20 31 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_5 T C T/C 40 25 15 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_6 T C T/C 45 22 23 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_7 T C T/C 36 29 7 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_8 T C T/C 45 25 20 LoH Transition CtoT FALSE 36.0588235294118 contig600029.417 AH88_9 T C T/C 28 17 11 LoH Transition CtoT FALSE 36.0588235294118 contig600029.461 AH88_1 G A G/G 48 48 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_10 G A G/G 44 44 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_11 G A G/G 37 37 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_12 G A G/G 58 58 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_13 G A G/G 49 49 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_14 G A G/A 39 31 8 DeNovo Transition GtoA FALSE yes 50.0588235294118 contig600029.461 AH88_15 G A G/G 43 43 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_16 G A G/G 50 50 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_17 G A G/G 45 45 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_2 G A G/G 57 57 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_3 G A G/G 56 56 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_4 G A G/G 66 66 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_5 G A G/G 54 54 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_6 G A G/G 67 67 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_7 G A G/G 47 47 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_8 G A G/G 51 51 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.461 AH88_9 G A G/G 40 40 0 DeNovo Transition GtoA FALSE 50.0588235294118 contig600029.462 AH88_1 G C G/G 48 48 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_10 G C G/G 44 44 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_11 G C G/G 37 37 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_12 G C G/G 58 58 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_13 G C G/G 49 49 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_14 G C G/C 37 27 10 DeNovo Transversion GtoC FALSE yes 50.0588235294118 contig600029.462 AH88_15 G C G/G 45 45 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_16 G C G/G 50 50 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_17 G C G/G 45 45 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_2 G C G/G 57 57 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_3 G C G/G 56 56 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_4 G C G/G 66 66 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_5 G C G/G 54 54 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_6 G C G/G 67 67 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_7 G C G/G 47 47 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_8 G C G/G 51 51 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.462 AH88_9 G C G/G 40 40 0 DeNovo Transversion GtoC FALSE 50.0588235294118 contig600029.514 AH88_1 T G T/T 37 37 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_10 T G T/T 34 34 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_11 T G T/T 29 29 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_12 T G T/T 36 36 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_13 T G T/T 29 29 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_14 T G T/G 13 10 3 DeNovo Transversion TtoG FALSE yes 32.8823529411765 contig600029.514 AH88_15 T G T/T 28 28 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_16 T G T/T 37 37 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_17 T G T/T 30 30 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_2 T G T/T 32 32 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_3 T G T/T 36 36 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_4 T G T/T 44 44 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_5 T G T/T 34 34 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_6 T G T/T 38 38 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_7 T G T/T 36 36 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_8 T G T/T 36 36 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600029.514 AH88_9 T G T/T 30 30 0 DeNovo Transversion TtoG FALSE 32.8823529411765 contig600156.187 AH88_1 A G A/G 22 19 3 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_10 A G A/G 34 29 5 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_11 A G A/G 22 18 4 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_12 A G A/G 28 23 5 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_13 A G A/G 21 15 6 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_14 A G A/G 27 20 7 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_15 A G A/G 21 14 7 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_16 A G A/G 25 17 8 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_17 A G A/G 17 13 4 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_2 A G A/G 19 17 2 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_3 A G A/G 16 14 2 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_4 A G A/G 19 14 5 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_5 A G A/G 23 18 5 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_6 A G A/G 21 14 7 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_7 A G A/G 20 16 4 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_8 A G A/A 28 28 0 LoH Transition GtoA FALSE 22.9411764705882 contig600156.187 AH88_9 A G A/G 27 22 5 LoH Transition GtoA FALSE 22.9411764705882 contig69367.386 AH88_1 C A C/A 8 3 5 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_10 C A C/A 18 2 16 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_11 C A C/A 21 5 16 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_12 C A C/A 17 6 11 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_13 C A C/A 18 5 13 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_14 C A C/A 10 3 7 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_15 C A C/A 14 3 11 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_16 C A C/A 13 3 10 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_17 C A C/A 11 2 9 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_2 C A C/A 17 5 12 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_3 C A C/A 21 3 18 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_4 C A C/A 18 5 13 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_5 C A C/A 20 4 16 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_6 C A C/A 13 4 9 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_7 C A C/A 24 5 19 LoH Transversion CtoA TRUE 16.1176470588235 contig69367.386 AH88_8 C A A/A 11 0 11 LoH Transversion CtoA TRUE yes 16.1176470588235 contig69367.386 AH88_9 C A C/A 20 8 12 LoH Transversion CtoA TRUE 16.1176470588235 contig72805.103 AH88_1 T G T/G 54 45 9 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_10 T G T/G 64 57 7 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_11 T G T/G 66 59 7 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_12 T G T/G 66 59 7 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_13 T G T/G 53 44 9 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_14 T G T/G 45 35 10 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_15 T G T/G 59 50 9 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_16 T G T/G 59 46 13 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_17 T G T/G 38 30 8 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_2 T G T/G 56 46 10 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_3 T G T/G 48 41 7 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_4 T G T/G 51 44 7 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_5 T G T/G 48 34 14 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_6 T G T/G 50 40 10 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_7 T G T/G 58 46 12 LoH Transversion GtoT TRUE 55.4117647058824 contig72805.103 AH88_8 T G T/T 64 64 0 LoH Transversion GtoT TRUE no 55.4117647058824 contig72805.103 AH88_9 T G T/G 63 52 11 LoH Transversion GtoT TRUE 55.4117647058824 contig74572_156171_213617_211945.1084 AH88_1 C T C/T 13 5 8 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_10 C T C/T 13 4 9 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_11 C T C/T 13 2 11 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_12 C T C/T 9 5 4 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_13 C T T/T 12 0 12 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_14 C T C/T 6 3 3 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_15 C T C/T 12 4 8 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_16 C T C/T 13 7 6 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_17 C T C/T 9 5 4 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_2 C T C/T 13 5 8 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_3 C T C/T 16 5 11 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_4 C T C/T 17 4 13 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_5 C T C/T 15 5 10 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_6 C T C/T 15 7 8 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_7 C T C/T 7 2 5 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_8 C T C/T 18 4 14 LoH Transition CtoT FALSE 12.7058823529412 contig74572_156171_213617_211945.1084 AH88_9 C T C/T 15 7 8 LoH Transition CtoT FALSE 12.7058823529412 contig97587.301 AH88_1 A G A/A 16 16 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_10 A G A/A 23 23 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_11 A G A/A 20 20 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_12 A G A/A 24 24 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_13 A G A/G 8 5 3 DeNovo Transition AtoG FALSE no 18.3529411764706 contig97587.301 AH88_14 A G A/A 22 22 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_15 A G A/A 26 26 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_16 A G A/A 18 18 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_17 A G A/A 14 14 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_2 A G A/A 17 17 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_3 A G A/A 16 16 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_4 A G A/A 20 20 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_5 A G A/A 16 16 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_6 A G A/A 12 12 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_7 A G A/A 18 18 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_8 A G A/A 24 24 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig97587.301 AH88_9 A G A/A 18 18 0 DeNovo Transition AtoG FALSE 18.3529411764706 contig98617_152207.1522 AH88_1 C T C/T 17 11 6 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_10 C T C/T 15 13 2 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_11 C T C/T 25 19 6 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_12 C T C/T 20 17 3 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_13 C T C/T 21 14 7 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_14 C T C/T 21 14 7 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_15 C T C/T 19 14 5 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_16 C T C/C 11 11 0 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_17 C T C/T 19 12 7 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_2 C T C/T 23 11 12 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_3 C T C/T 25 15 10 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_4 C T C/T 18 15 3 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_5 C T C/T 18 13 5 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_6 C T C/T 17 13 4 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_7 C T C/T 21 15 6 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_8 C T C/T 17 11 6 LoH Transition TtoC FALSE 19.1764705882353 contig98617_152207.1522 AH88_9 C T C/T 19 15 4 LoH Transition TtoC FALSE 19.1764705882353