Supplementary Table 2. Alignment summaries for all replicates. Note the >50% multi-mapping reads for replicate 11. [A] Non-normalised data. [B] Re-sampled data.,,,,,,,,,
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[A],,,,,,,,,
Replicate,Number of input reads,Average input read length,Uniquely mapped reads %,Average mapped length,% of reads mapped to multiple loci,% of reads mapped to too many loci,% of reads unmapped: too many mismatches,% of reads unmapped: too short,% of reads unmapped: other
1,108782881,202,73.44%,198.01,3.32%,0.38%,0.00%,22.85%,0.00%
2,94489754,202,73.89%,197.89,3.76%,0.44%,0.00%,21.91%,0.00%
3,120120616,202,74.88%,200.59,4.05%,0.41%,0.00%,20.65%,0.00%
4,112037084,202,73.54%,200.34,4.16%,0.41%,0.00%,21.88%,0.00%
5,130306701,202,76.59%,198.44,6.20%,0.52%,0.00%,16.70%,0.00%
6,94151244,202,43.39%,198.13,39.06%,1.90%,0.00%,15.65%,0.01%
7,124180445,202,74.74%,199.94,3.90%,0.43%,0.00%,20.92%,0.00%
8,102223235,202,71.92%,200.84,13.43%,0.81%,0.00%,13.83%,0.01%
9,94928726,202,75.11%,200.97,7.19%,0.60%,0.00%,17.10%,0.01%
10,96639066,202,73.05%,200.89,13.03%,0.81%,0.00%,13.11%,0.00%
11,87809552,202,38.86%,200.69,53.41%,0.73%,0.00%,7.00%,0.00%
12,112009162,202,74.60%,200.67,10.91%,0.72%,0.00%,13.77%,0.00%
13,102565765,202,75.92%,200.71,9.93%,0.58%,0.00%,13.56%,0.00%
14,77304267,202,72.52%,200.88,13.32%,0.68%,0.00%,13.48%,0.00%
15,106693978,202,71.43%,200.84,3.62%,0.38%,0.00%,24.57%,0.00%
16,111209624,202,69.46%,200.88,2.56%,0.32%,0.00%,27.66%,0.00%
17,111062395,202,73.33%,200.99,3.73%,0.37%,0.00%,22.56%,0.00%
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[B],,,,,,,,,
Replicate,Number of input reads,Average input read length,Uniquely mapped reads %,Average mapped length,% of reads mapped to multiple loci,% of reads mapped to too many loci,% of reads unmapped: too many mismatches,% of reads unmapped: too short,% of reads unmapped: other
1,77304266,202,73.57%,198.01,3.33%,0.38%,0.00%,22.71%,0.00%
2,77304266,202,74.02%,197.9,3.77%,0.44%,0.00%,21.78%,0.00%
3,77304266,202,74.90%,200.59,4.05%,0.41%,0.00%,20.63%,0.00%
4,77304266,202,73.54%,200.34,4.16%,0.41%,0.00%,21.88%,0.00%
5,77304266,202,76.72%,198.44,6.20%,0.52%,0.00%,16.56%,0.00%
6,77304266,202,43.47%,198.12,39.08%,1.90%,0.00%,15.55%,0.01%
7,77304266,202,74.74%,199.94,3.90%,0.43%,0.00%,20.92%,0.00%
8,77304266,202,71.95%,200.83,13.42%,0.81%,0.00%,13.82%,0.01%
9,77304266,202,75.13%,200.97,7.18%,0.60%,0.00%,17.08%,0.01%
10,77304266,202,73.07%,200.88,13.02%,0.81%,0.00%,13.10%,0.00%
11,77304266,202,38.86%,200.69,53.41%,0.73%,0.00%,7.00%,0.00%
12,77304266,202,74.59%,200.67,10.91%,0.72%,0.00%,13.77%,0.00%
13,77304266,202,75.92%,200.71,9.93%,0.58%,0.00%,13.56%,0.00%
14,77304266,202,72.52%,200.88,13.32%,0.68%,0.00%,13.48%,0.00%
15,77304266,202,71.43%,200.84,3.62%,0.38%,0.00%,24.57%,0.00%
16,77304266,202,69.45%,200.88,2.56%,0.32%,0.00%,27.66%,0.00%
17,77304266,202,73.33%,200.99,3.74%,0.37%,0.00%,22.56%,0.00%