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Reagent contamination can critically impact sequence-based microbiome analyses
Susannah J Salter, Michael J Cox, Elena M Turek, Szymon T Calus, William O Cookson, Miriam F Moffatt, Paul Turner, Julian Parkhill, Nick Loman, Alan W Walker
doi: https://doi.org/10.1101/007187
Susannah J Salter
1Pathogen Genomics Group, Wellcome Trust Sanger Institute, Hinxton, CB10 ISA, UK
Michael J Cox
2Molecular Genetics and Genomics, National Heart and Lung Institute, Imperial College London, SW3 6LY
Elena M Turek
2Molecular Genetics and Genomics, National Heart and Lung Institute, Imperial College London, SW3 6LY
Szymon T Calus
3Institute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK
William O Cookson
2Molecular Genetics and Genomics, National Heart and Lung Institute, Imperial College London, SW3 6LY
Miriam F Moffatt
2Molecular Genetics and Genomics, National Heart and Lung Institute, Imperial College London, SW3 6LY
Paul Turner
4Shoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot, Thailand
5Centre for Tropical Medicine, Nuffield Department of Medicine, University of Oxford, Oxford, UK
Julian Parkhill
1Pathogen Genomics Group, Wellcome Trust Sanger Institute, Hinxton, CB10 ISA, UK
Nick Loman
3Institute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK
Alan W Walker
1Pathogen Genomics Group, Wellcome Trust Sanger Institute, Hinxton, CB10 ISA, UK
6Microbiology Group, Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, AB219SB, UK
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Posted July 16, 2014.
Reagent contamination can critically impact sequence-based microbiome analyses
Susannah J Salter, Michael J Cox, Elena M Turek, Szymon T Calus, William O Cookson, Miriam F Moffatt, Paul Turner, Julian Parkhill, Nick Loman, Alan W Walker
bioRxiv 007187; doi: https://doi.org/10.1101/007187
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