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Haplotype block dynamics in hybrid populations

Thijs Janzen, Arne W. Nolte, Arne Traulsen
doi: https://doi.org/10.1101/058107
Thijs Janzen
Max Planck Institute for Evolutionary Biology, Germany
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  • For correspondence: janzen@evolbio.mpg.de
Arne W. Nolte
Max Planck Institute for Evolutionary Biology, Germany
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Arne Traulsen
Max Planck Institute for Evolutionary Biology, Germany
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Abstract

When species originate through hybridization, the genomes of the ancestral species are blended together. Over time genomic blocks that originate from either one of the ancestral species accumulate in the hybrid genome through genetic recombination. Modeling the accumulation of ancestry blocks can elucidate processes and patterns of genomic admixture. However, previous models have ignored ancestry block dynamics for chromosomes that consist of a discrete, finite number of chromosomal elements. Here we present an analytical treatment of the dynamics of the mean number of blocks over time, for continuous and discrete chromosomes, in finite and infinite populations. We describe the mean number of haplotype blocks as a universal function dependent on population size, the number of genomic elements per chromosome, the number of recombination events, and the initial relative frequency of the ancestral species.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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  • Posted June 9, 2016.

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Haplotype block dynamics in hybrid populations
Thijs Janzen, Arne W. Nolte, Arne Traulsen
bioRxiv 058107; doi: https://doi.org/10.1101/058107
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Haplotype block dynamics in hybrid populations
Thijs Janzen, Arne W. Nolte, Arne Traulsen
bioRxiv 058107; doi: https://doi.org/10.1101/058107

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