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Splice Expression Variation Analysis (SEVA) for Differential Gene Isoform Usage in Cancer
Bahman Afsari, Theresa Guo, Michael Considine, Liliana Florea, Dylan Kelley, Emily Flam, Patrick K. Ha, Donald Geman, Michael F. Ochs, Joseph A. Califano, Daria A. Gaykalova, Alexander V. Favorov, View ORCID ProfileElana J. Fertig
doi: https://doi.org/10.1101/091637
Bahman Afsari
1Department of Oncology, The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21231, USA
Theresa Guo
2Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA
Michael Considine
1Department of Oncology, The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21231, USA
Liliana Florea
3McKusick-Nathans Institute of Genetic Medicine, Department of Medicine, Johns Hopkins University, Baltimore, MD, 21205, USA
Dylan Kelley
2Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA
Emily Flam
2Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA
Patrick K. Ha
4Department of Otolaryngology - Head and Neck Surgery (OHNS), University of California, San Francisco, CA, 94143, USA
Donald Geman
5Institute for Computational Medicine, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD, 21218, USA
6Department of Applied Mathematics and Statistics, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD, 21218, USA
Michael F. Ochs
7Department of Mathematics and Statistics, The College of New Jersey, Ewing Township, NJ, 08618, USA
Joseph A. Califano
8Head and Neck Cancer Center, Moores Cancer Center, University of California, San Diego, 3855 Health Sciences Dr., MC 0803, La Jolla, CA, 92093, USA
9Division of Otolaryngology-Head and Neck Surgery, Department of Surgery, 3855 Health Sciences Dr., MC 0803, La Jolla, CA, 92037, USA
Daria A. Gaykalova
2Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA
Alexander V. Favorov
1Department of Oncology, The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21231, USA
10Laboratory of Systems Biology and Computational Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, 119991, Russia
11Laboratory of Bioinformatics, Research Institute of Genetics and Selection of Industrial Microorganisms, Moscow, 117545, Russia
Elana J. Fertig
1Department of Oncology, The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21231, USA
Article usage
Posted December 12, 2016.
Splice Expression Variation Analysis (SEVA) for Differential Gene Isoform Usage in Cancer
Bahman Afsari, Theresa Guo, Michael Considine, Liliana Florea, Dylan Kelley, Emily Flam, Patrick K. Ha, Donald Geman, Michael F. Ochs, Joseph A. Califano, Daria A. Gaykalova, Alexander V. Favorov, Elana J. Fertig
bioRxiv 091637; doi: https://doi.org/10.1101/091637
Splice Expression Variation Analysis (SEVA) for Differential Gene Isoform Usage in Cancer
Bahman Afsari, Theresa Guo, Michael Considine, Liliana Florea, Dylan Kelley, Emily Flam, Patrick K. Ha, Donald Geman, Michael F. Ochs, Joseph A. Califano, Daria A. Gaykalova, Alexander V. Favorov, Elana J. Fertig
bioRxiv 091637; doi: https://doi.org/10.1101/091637
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