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SQANTI: extensive characterization of long read transcript sequences for quality control in full-length transcriptome identification and quantification
Manuel Tardaguila, Lorena de la Fuente, Cristina Marti, Cécile Pereira, Hector del Risco, Marc Ferrell, Maravillas Mellado, Marissa Macchietto, Kenneth Verheggen, Mariola Edelmann, Iakes Ezkurdia, Jesus Vazquez, Michael Tress, Ali Mortazavi, Lennart Martens, Susana Rodriguez-Navarro, Victoria Moreno, Ana Conesa
doi: https://doi.org/10.1101/118083
Manuel Tardaguila
1Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, USA
Lorena de la Fuente
2Genomics of Gene Expression Laboratory, Centro de Investigaciones Principe Felipe (CIPF), Valencia, Spain
Cristina Marti
2Genomics of Gene Expression Laboratory, Centro de Investigaciones Principe Felipe (CIPF), Valencia, Spain
Cécile Pereira
1Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, USA
Hector del Risco
1Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, USA
Marc Ferrell
1Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, USA
Maravillas Mellado
3Neural Regeneration Laboratory, CIPF, Valencia, Spain
Marissa Macchietto
4Department of Developmental and Cell Biology, University of California, Irvine, CA, USA
Kenneth Verheggen
5VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium
6Department of Biochemistry, Ghent University, Ghent, Belgium
Mariola Edelmann
1Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, USA
Iakes Ezkurdia
7Centro Nacional de Investigaciones Cardiovasculares CNIC, Madrid, Spain
Jesus Vazquez
7Centro Nacional de Investigaciones Cardiovasculares CNIC, Madrid, Spain
Michael Tress
8Centro Nacional de Investigaciones Oncologicas CNIO, Madrid, Spain
Ali Mortazavi
4Department of Developmental and Cell Biology, University of California, Irvine, CA, USA
Lennart Martens
5VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium
6Department of Biochemistry, Ghent University, Ghent, Belgium
Susana Rodriguez-Navarro
9RNA transport and metabolism Laboratory, CIPF, Valencia, Spain
Victoria Moreno
3Neural Regeneration Laboratory, CIPF, Valencia, Spain
Ana Conesa
1Department of Microbiology and Cell Science, Institute for Food and Agricultural Sciences, University of Florida, USA
2Genomics of Gene Expression Laboratory, Centro de Investigaciones Principe Felipe (CIPF), Valencia, Spain
Article usage
Posted March 18, 2017.
SQANTI: extensive characterization of long read transcript sequences for quality control in full-length transcriptome identification and quantification
Manuel Tardaguila, Lorena de la Fuente, Cristina Marti, Cécile Pereira, Hector del Risco, Marc Ferrell, Maravillas Mellado, Marissa Macchietto, Kenneth Verheggen, Mariola Edelmann, Iakes Ezkurdia, Jesus Vazquez, Michael Tress, Ali Mortazavi, Lennart Martens, Susana Rodriguez-Navarro, Victoria Moreno, Ana Conesa
bioRxiv 118083; doi: https://doi.org/10.1101/118083
SQANTI: extensive characterization of long read transcript sequences for quality control in full-length transcriptome identification and quantification
Manuel Tardaguila, Lorena de la Fuente, Cristina Marti, Cécile Pereira, Hector del Risco, Marc Ferrell, Maravillas Mellado, Marissa Macchietto, Kenneth Verheggen, Mariola Edelmann, Iakes Ezkurdia, Jesus Vazquez, Michael Tress, Ali Mortazavi, Lennart Martens, Susana Rodriguez-Navarro, Victoria Moreno, Ana Conesa
bioRxiv 118083; doi: https://doi.org/10.1101/118083
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