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Common variants of NRXN1, LRP1B and RORA are associated with increased ventricular volumes in psychosis - GWAS findings from the B-SNIP deep phenotyping study

View ORCID ProfileNey Alliey-Rodriguez, Tamar A. Grey, Rebecca Shafee, Jaya Padmanabhan, Neeraj Tandon, Madeline Klinger, Jonathan Spring, Lucas Coppes, Katherine Reis, Matcheri S. Keshavan, Diane Gage, Steven McCarroll, Jeffrey R. Bishop, Scot Hill, James Reilly, Rebekka Lencer, Brett Clementz, Peter Buckley, Shashwath Meda, Balaji Narayanan, David Glahn, Godfrey Pearlson, Elena Ivleva, Carol Tamminga, John Sweeney, David Curtis, Sarah Keedy, Judith Badner, Chunyu Liu, Elliot S. Gershon
doi: https://doi.org/10.1101/175489
Ney Alliey-Rodriguez
University of Chicago, Department of Psychiatry and Behavioral Neurosciences;
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  • ORCID record for Ney Alliey-Rodriguez
  • For correspondence: nalliey@gmail.com
Tamar A. Grey
Massachusetts Institute of Technology;
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Rebecca Shafee
Harvard Medical School, Department of Genetics;
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Jaya Padmanabhan
Harvard Medical School, Department of Psychiatry;
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Neeraj Tandon
Harvard Medical School, Department of Psychiatry;
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Madeline Klinger
University of Chicago;
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Jonathan Spring
University of Chicago;
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Lucas Coppes
University of Chicago, Department of Psychiatry and Behavioral Neurosciences;
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Katherine Reis
University of Chicago;
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Matcheri S. Keshavan
Harvard Medical School, Department of Psychiatry;
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Diane Gage
Broad Institute of MIT and Harvard;
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Steven McCarroll
Broad Institute of MIT and Harvard;
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Jeffrey R. Bishop
University of Minnesota, Department of Experimental and Clinical Pharmacology;
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Scot Hill
Rosalind Franklin University;
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James Reilly
Northwestern University;
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Rebekka Lencer
University of Muenster;
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Brett Clementz
University of Georgia - Athens, Department of Psychology;
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Peter Buckley
Virginia Commonwealth University;
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Shashwath Meda
Yale University Departments of Psychiatry & Neuroscience;
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Balaji Narayanan
Yale University Departments of Psychiatry & Neuroscience;
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David Glahn
Yale University Departments of Psychiatry & Neuroscience;
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Godfrey Pearlson
Yale University Departments of Psychiatry & Neuroscience;
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Elena Ivleva
University of Texas Southwestern Medical Center, Department of Psychiatry;
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Carol Tamminga
University of Texas Southwestern Medical Center, Department of Psychiatry;
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John Sweeney
University of Texas Southwestern Medical Center, Department of Psychiatry;
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David Curtis
University College London;
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Sarah Keedy
University of Chicago, Department of Psychiatry and Behavioral Neurosciences;
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Judith Badner
Rush University Medical Center;
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Chunyu Liu
University of Illinois at Chicago;
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Elliot S. Gershon
Univ. of Chicago, Depts. of Psychiatry and Behavioral Neurosciences and Human Genetics
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Abstract

Schizophrenia, Schizoaffective, and Bipolar Disorders share common illness traits, intermediate phenotypes and a partially overlapping polygenic basis. We performed GWAS on deep phenotyping data, including structural MRI and DTI, clinical, and behavioral scales from 1,115 cases and controls. Significant associations were observed with two cerebrospinal fluid volumes: the temporal horn of left lateral ventricle was associated with NRXN1, and the volume of the cavum septum pellucidum was associated with LRP1B and RORA. Both volumes were associated with illness. Suggestive associations were observed with local gyrification indices, fractional anisotropy and age at onset. This is the first report of common genetic variants associated with these intermediate phenotypes.

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The copyright holder for this preprint is the author/funder. It is made available under a CC-BY-NC-ND 4.0 International license.
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  • Posted August 16, 2017.

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Common variants of NRXN1, LRP1B and RORA are associated with increased ventricular volumes in psychosis - GWAS findings from the B-SNIP deep phenotyping study
Ney Alliey-Rodriguez, Tamar A. Grey, Rebecca Shafee, Jaya Padmanabhan, Neeraj Tandon, Madeline Klinger, Jonathan Spring, Lucas Coppes, Katherine Reis, Matcheri S. Keshavan, Diane Gage, Steven McCarroll, Jeffrey R. Bishop, Scot Hill, James Reilly, Rebekka Lencer, Brett Clementz, Peter Buckley, Shashwath Meda, Balaji Narayanan, David Glahn, Godfrey Pearlson, Elena Ivleva, Carol Tamminga, John Sweeney, David Curtis, Sarah Keedy, Judith Badner, Chunyu Liu, Elliot S. Gershon
bioRxiv 175489; doi: https://doi.org/10.1101/175489
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Common variants of NRXN1, LRP1B and RORA are associated with increased ventricular volumes in psychosis - GWAS findings from the B-SNIP deep phenotyping study
Ney Alliey-Rodriguez, Tamar A. Grey, Rebecca Shafee, Jaya Padmanabhan, Neeraj Tandon, Madeline Klinger, Jonathan Spring, Lucas Coppes, Katherine Reis, Matcheri S. Keshavan, Diane Gage, Steven McCarroll, Jeffrey R. Bishop, Scot Hill, James Reilly, Rebekka Lencer, Brett Clementz, Peter Buckley, Shashwath Meda, Balaji Narayanan, David Glahn, Godfrey Pearlson, Elena Ivleva, Carol Tamminga, John Sweeney, David Curtis, Sarah Keedy, Judith Badner, Chunyu Liu, Elliot S. Gershon
bioRxiv 175489; doi: https://doi.org/10.1101/175489

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