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Phylogenomics of montane frogs of the Brazilian Atlantic Forest supports a scenario of isolation in sky islands followed by relative climatic stability

View ORCID ProfileMarcio R. Pie, Brant C Faircloth, Luiz Fernando Ribeiro, Marcos R. Bornschein, John McCormack
doi: https://doi.org/10.1101/226159
Marcio R. Pie
Universidade Federal do Parana;
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  • For correspondence: marcio.pie@gmail.com
Brant C Faircloth
Louisiana State University;
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Luiz Fernando Ribeiro
Pontificia Universidade Catolica do Parana;
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Marcos R. Bornschein
Universidade Estadual Paulista
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John McCormack
Louisiana State University;
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Abstract

Despite encompassing a relatively small geographical area, montane regions harbor disproportionately high levels of species diversity and endemism. Yet, relatively little is known about the evolutionary mechanisms ultimately leading to montane diversity. In this study, we use target capture of ultraconserved elements to investigate the phylogenetic relationships and diversification patterns of Melanophryniscus (Bufonidae) and Brachycephalus (Brachycephalidae), two frog genera that occur in sky islands of the southern Atlantic Forest of Brazil. Specifically, we test whether diversification of montane species in these genera can be explained by a single climatic shift leading to isolation in sky islands, followed by relative climatic stability that maintained populations in allopatry. In both genera, the topologies inferred using concatenation and coalescent-based methods were concordant and had strong nodal support, except for a few recent splits. These recent splits tended to be supported by more informative loci (those with higher average bootstrap support), suggesting that, while individual trees may be well resolved, the relationships they recover are being obscured by non-informative data. Divergence dating of a combined dataset using both genera is consistent with concordant timing of their diversification. These results support the scenario of diversification-by-isolation in sky islands, and suggest that allopatry due to climatic gradients in montane regions are an important mechanism for generating species diversity and endemism in these regions.

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The copyright holder for this preprint is the author/funder. It is made available under a CC-BY-NC 4.0 International license.
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  • Posted November 28, 2017.

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Phylogenomics of montane frogs of the Brazilian Atlantic Forest supports a scenario of isolation in sky islands followed by relative climatic stability
Marcio R. Pie, Brant C Faircloth, Luiz Fernando Ribeiro, Marcos R. Bornschein, John McCormack
bioRxiv 226159; doi: https://doi.org/10.1101/226159
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Phylogenomics of montane frogs of the Brazilian Atlantic Forest supports a scenario of isolation in sky islands followed by relative climatic stability
Marcio R. Pie, Brant C Faircloth, Luiz Fernando Ribeiro, Marcos R. Bornschein, John McCormack
bioRxiv 226159; doi: https://doi.org/10.1101/226159

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